RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TPP2P29144 1249 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 RGS4P49798 205 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 ST13P50502 369 aaKnown RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 CCR8P51685 355 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 TBPL1P62380 186 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 HSF1Q00613 529 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 LCTLQ6UWM7 567 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 C3P1Q6ZMU1 363 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 QSOX2Q6ZRP7 698 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 KIAA0408Q6ZU52 694 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 NCCRP1Q6ZVX7 275 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 PIWIL4Q7Z3Z4 852 aaKnown RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 FGD2Q7Z6J4 655 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 DENND6AQ8IWF6 608 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 CPSF7Q8N684 471 aaKnown RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF740Q8NDX6 193 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 MCUQ8NE86 351 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 NFAM1Q8NET5 270 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 C16orf52Q8NHV5 167 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 ZCCHC10Q8TBK6 192 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 FAM57AQ8TBR7 257 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 EEF1AKMT1Q8WVE0 214 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 TSLPQ969D9 159 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 HIST1H2AHQ96KK5 128 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 HIST1H2AJQ99878 128 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 H2AFJQ9BTM1 129 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 DEFB126Q9BYW3 111 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 KCNJ16Q9NPI9 418 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 FBXO6Q9NRD1 293 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 TRMT6Q9UJA5 497 aaKnown RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 FBXO5Q9UKT4 447 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 GUCA1BQ9UMX6 200 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 NEU2Q9Y3R4 380 aa8.19□□□□□ -1.1
CAPN3-208ENST00000397204 INTS1Q8N201 2190 aaKnown RBP8.19□□□□□ -1.1
CAPN3-208ENST00000397204 ELOA3CA0A087WX78 387 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 A0A1B0GTH9 108 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 TRBC2A0A5B9 178 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 URADA6NGE7 173 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF860A6NHJ4 632 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ELOA3DA6NLF2 546 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 FCHO1O14526 889 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 TFECO14948 347 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ZNHIT1O43257 154 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 OR1F1O43749 312 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 PEX1O43933 1283 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 DNAJB6O75190 326 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 CDC123O75794 336 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 CDH1P12830 882 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 CHRNB4P30926 498 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 PTGER1P34995 402 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 IDH3AP50213 366 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 MEOX1P50221 254 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ITGA8P53708 1063 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 RGS1Q08116 209 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 GPS1Q13098 491 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 SP140Q13342 867 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 C11orf91Q3C1V1 193 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ELOA3BQ3SY89 546 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 DEFB134Q4QY38 66 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 CES4AQ5XG92 561 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 DUPD1Q68J44 220 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ARHGAP11AQ6P4F7 1023 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 PAOXQ6QHF9 649 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 LINC00114Q6XXX2 140 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 CEP128Q6ZU80 1094 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ACAD11Q709F0 780 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ABHD13Q7L211 337 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 SULF2Q8IWU5 870 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 CPNE9Q8IYJ1 553 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 KIF2BQ8N4N8 673 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 GPATCH11Q8N954 259 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ZFP62Q8NB50 900 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ELOA3Q8NG57 546 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 OR5T3Q8NGG3 340 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 RND1Q92730 232 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF669Q96BR6 464 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ALKBH8Q96BT7 664 aaKnown RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 SNF8Q96H20 258 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 AARSD1Q9BTE6 412 aaKnown RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ATG10Q9H0Y0 220 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 TP63Q9H3D4 680 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 C20orf96Q9NUD7 363 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-208ENST00000397204 TAS2R13Q9NYV9 303 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 TNFRSF10DQ9UBN6 386 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 KCNN3Q9UGI6 736 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ZFP69BQ9UJL9 534 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 ADAMTS6Q9UKP5 1117 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 SH2B3Q9UQQ2 575 aa8.18□□□□□ -1.1
CAPN3-208ENST00000397204 SCN3AQ9NY46 2000 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 IGKV3D-11A0A0A0MRZ8 115 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TCRBV16S1A1N1A0A5B0 115 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 FAM221AA4D161 298 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 SAGE2PA6NJ88 616 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 PSMD12O00232 456 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-208ENST00000397204 NDUFS4O43181 175 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 CEP104O60308 925 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TOXO94900 526 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 KRT14P02533 472 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 SERPIND1P05546 499 aa8.17□□□□□ -1.1
CAPN3-208ENST00000397204 TPOP07202 933 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms