RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 MLXIPLQ9NP71 852 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 MKKSQ9NPJ1 570 aaPredicted RBP18.18■□□□□ 0.5
HOXA9-202ENST00000396345 ZNF446Q9NWS9 450 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 NKIRAS1Q9NYS0 192 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 HCN3Q9P1Z3 774 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 NXT1Q9UKK6 140 aaKnown RBP18.18■□□□□ 0.5
HOXA9-202ENST00000396345 PPT2Q9UMR5 302 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 PTPRQQ9UMZ3 2332 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 LAMA5O15230 3695 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 IGLV3-12A0A075B6K2 115 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 VSTM2BA6NLU5 285 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 K7ENP7 123 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 SAP18O00422 153 aaKnown RBP18.17■□□□□ 0.5
HOXA9-202ENST00000396345 MANBAO00462 879 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 NKX2-8O15522 239 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 CRCPO75575 148 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 PDYNP01213 254 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 ZGLP1P0C6A0 271 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 FOLR3P41439 243 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 FOXL2P58012 376 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 CXADRP78310 365 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 OLR1P78380 273 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 RCN2Q14257 317 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 VWA2Q5GFL6 755 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 TCHHL1Q5QJ38 904 aaPredicted RBP18.17■□□□□ 0.5
HOXA9-202ENST00000396345 FAM219BQ5XKK7 198 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 INO80CQ6PI98 192 aaPredicted RBP18.17■□□□□ 0.5
HOXA9-202ENST00000396345 UBE3DQ7Z6J8 389 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 OR5T3Q8NGG3 340 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 OR2Y1Q8NGV0 311 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 STT3BQ8TCJ2 826 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 RGMAQ96B86 450 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 MIEF2Q96C03 454 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 QRFPRQ96P65 431 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 KCNA7Q96RP8 456 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 SERPINI1Q99574 410 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 TBCDQ9BTW9 1192 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 SHCBP1LQ9BZQ2 653 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 SOX17Q9H6I2 414 aaPredicted RBP18.17■□□□□ 0.5
HOXA9-202ENST00000396345 CLK4Q9HAZ1 481 aaKnown RBP18.17■□□□□ 0.5
HOXA9-202ENST00000396345 FARSBQ9NSD9 589 aaKnown RBP18.17■□□□□ 0.5
HOXA9-202ENST00000396345 TIMM22Q9Y584 194 aa18.17■□□□□ 0.5
HOXA9-202ENST00000396345 CHST10O43529 356 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 B3GALT2O43825 422 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 ULK1O75385 1050 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 RECKO95980 971 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 NEFHP12036 1026 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 SERPINB5P36952 375 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 RAP1GDS1P52306 607 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 CUL3Q13618 768 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 ERV3-1Q14264 604 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 AP5B1Q2VPB7 878 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 C19orf48Q6RUI8 117 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 SHISA6Q6ZSJ9 500 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 CUZD1Q86UP6 607 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 PRSS58Q8IYP2 241 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 OR6Y1Q8NGX8 325 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 MGARPQ8TDB4 240 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 SPSB2Q99619 263 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 TGIF2Q9GZN2 237 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 ROGDIQ9GZN7 287 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 COPS7BQ9H9Q2 264 aaPredicted RBP18.16■□□□□ 0.5
HOXA9-202ENST00000396345 EML4Q9HC35 981 aaKnown RBP18.16■□□□□ 0.5
HOXA9-202ENST00000396345 PRDM7Q9NQW5 492 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 C14orf105Q9NVL8 296 aa18.16■□□□□ 0.5
HOXA9-202ENST00000396345 HMGB1P1B2RPK0 211 aaPredicted RBP18.15■□□□□ 0.5
HOXA9-202ENST00000396345 RTCAO00442 366 aaKnown RBP18.15■□□□□ 0.5
HOXA9-202ENST00000396345 DNAJB6O75190 326 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 ETHE1O95571 254 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 SERPINE1P05121 402 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 PRKAR1AP10644 381 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 XCR1P46094 333 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 MTTPP55157 894 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 FOXA1P55317 472 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 WDR4P57081 412 aaKnown RBP18.15■□□□□ 0.5
HOXA9-202ENST00000396345 KLC1Q07866 573 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 GALNT1Q10472 559 aaPredicted RBP18.15■□□□□ 0.5
HOXA9-202ENST00000396345 IL10RAQ13651 578 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 CHI3L2Q15782 390 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 CRTC2Q53ET0 693 aaPredicted RBP18.15■□□□□ 0.5
HOXA9-202ENST00000396345 ARL13AQ5H913 290 aaPredicted RBP18.15■□□□□ 0.5
HOXA9-202ENST00000396345 OR4C11Q6IEV9 310 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 TMEM151BQ8IW70 566 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 ZC3H7AQ8IWR0 971 aaKnown RBP18.15■□□□□ 0.5
HOXA9-202ENST00000396345 PEX11GQ96HA9 241 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 SERINC2Q96SA4 455 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 NPLQ9BXD5 320 aaPredicted RBP18.15■□□□□ 0.5
HOXA9-202ENST00000396345 BRF2Q9HAW0 419 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 TNFRSF12AQ9NP84 129 aa18.15■□□□□ 0.5
HOXA9-202ENST00000396345 CDC14CA4D256 554 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 PLPP1O14494 284 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 SEMA3DO95025 777 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 BMP10O95393 424 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 CHRNGP07510 517 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 UMODP07911 640 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 UROSP10746 265 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 IL10P22301 178 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 ATP5A1P25705 553 aaKnown RBP18.14■□□□□ 0.49
HOXA9-202ENST00000396345 CERS1P27544 350 aa18.14■□□□□ 0.49
HOXA9-202ENST00000396345 SSR2P43308 183 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1110.3 ms