RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 EPB41L4BQ9H329 900 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 NECTIN3Q9NQS3 549 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 ZNF701Q9NV72 531 aaPredicted RBP12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 PIH1D1Q9NWS0 290 aaKnown RBP12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 HPF1Q9NWY4 346 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 SLC2A6Q9UGQ3 507 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 FBXW2Q9UKT8 454 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 RIMKLBQ9ULI2 386 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 ERVK-11Q9UQG0 969 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 TESMINQ9Y4I5 508 aa12.62□□□□□ -0.39
VCPKMT-201ENST00000395859 FREM3P0C091 2139 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 HEATR5AQ86XA9 2040 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 AHRRA9YTQ3 701 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 CHST10O43529 356 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ZNF354AO60765 605 aaPredicted RBP12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 OR2J2O76002 312 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 SLC16A8O95907 504 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 MAOAP21397 527 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 JAK1P23458 1154 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ATP5DP30049 168 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 HSD17B2P37059 387 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 SOX3P41225 446 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 DNASE1L1P49184 302 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ASTE1Q2TB18 679 aaPredicted RBP12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ZNF750Q32MQ0 723 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 CCDC38Q502W7 563 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ADGRD1Q6QNK2 874 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 IL20RBQ6UXL0 311 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 C20orf204Q6ZNR8 217 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ABHD13Q7L211 337 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 LDB1Q86U70 411 aaPredicted RBP12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 SLC26A11Q86WA9 606 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 TXLNBQ8N3L3 684 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 CAMKVQ8NCB2 501 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 NTNG2Q96CW9 530 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 SCYL1Q96KG9 808 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ZNF778Q96MU6 729 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 FOPNLQ96NB1 174 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 RASL10BQ96S79 203 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 TTC1Q99614 292 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 DNAJC7Q99615 494 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 C19orf24Q9BVV8 132 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 LDAHQ9H6V9 325 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ZNF703Q9H7S9 590 aaPredicted RBP12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ACKR4Q9NPB9 350 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 TMEM184CQ9NVA4 438 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 HYOU1Q9Y4L1 999 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 ATG4BQ9Y4P1 393 aa12.61□□□□□ -0.39
VCPKMT-201ENST00000395859 H7C0C1 242 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 SMAPO00193 183 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 KPNA5O15131 536 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 CD5LO43866 347 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 LCMT2O60294 686 aaKnown RBP12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 B4GALT2O60909 372 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 GYPCP04921 128 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 RFPL3SP0C7P2 107 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 FAM157CP0CG43 387 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 RPS3P23396 243 aaKnown RBP eCLIP12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 LOXP28300 417 aaPredicted RBP12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 COILP38432 576 aaPredicted RBP12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 SLC1A1P43005 524 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 ATP5OP48047 213 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 NSUN5P2Q63ZY6 315 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 OTOAQ7RTW8 1153 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 ADCK2Q7Z695 626 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 CCDC170Q8IYT3 715 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 MEIOBQ8N635 442 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 GOLM1Q8NBJ4 401 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 MAPK1IP1LQ8NDC0 245 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 ZNF740Q8NDX6 193 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 NEIL3Q8TAT5 605 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 SKA2Q8WVK7 121 aaPredicted RBP12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 VMP1Q96GC9 406 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 MARK4Q96L34 752 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 PANX3Q96QZ0 392 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 LIN28AQ9H9Z2 209 aaKnown RBP12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 SH2D2AQ9NP31 389 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 PRDM9Q9NQV7 894 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 GALNT8Q9NY28 637 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 MARCH4Q9P2E8 410 aaPredicted RBP12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 MYOTQ9UBF9 498 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 TRRAPQ9Y4A5 3859 aa12.6□□□□□ -0.39
VCPKMT-201ENST00000395859 MBD3L3A6NE82 208 aaPredicted RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 A8MUA0 341 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 CTIFO43310 598 aaKnown RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 PSTPIP1O43586 416 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 IL2RAP01589 272 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 CCL3P10147 92 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 COMTP21964 271 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 HRH2P25021 359 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 CTSSP25774 331 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 OPRM1P35372 400 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 AGFG1P52594 562 aaKnown RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 ADARP55265 1226 aaKnown RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 OLR1P78380 273 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 CRYZQ08257 329 aaKnown RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 HERC3Q15034 1050 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 SIX1Q15475 284 aaPredicted RBP12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 SLC18A3Q16572 532 aa12.59□□□□□ -0.39
VCPKMT-201ENST00000395859 CHRFAM7AQ494W8 412 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms