RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 EXTL3O43909 919 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 ATP6V1G1O75348 118 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 CLPTM1O96005 669 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 EPOP01588 193 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 ZCCHC18P0CG32 403 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 FAM157CP0CG43 387 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 ERVK-10P10266 1014 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 KRT5P13647 590 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 CEACAM1P13688 526 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 NSFP46459 744 aaKnown RBP4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 LINC01547P58512 204 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 DCDC1P59894 354 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 GMFBP60983 142 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 BTG1P62324 171 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 CEACAM7Q14002 265 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 GRB14Q14449 540 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 KRT31Q15323 416 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 SPHARQ15513 63 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 DUSP5Q16690 384 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 LRRC37A5PQ49AS3 106 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 HERC4Q5GLZ8 1057 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 SLC25A47Q6Q0C1 308 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 CYP4V2Q6ZWL3 525 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 ZDHHC17Q8IUH5 632 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 MARVELD2Q8N4S9 558 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 ZNF524Q96C55 264 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 C16orf45Q96MC5 204 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 GPR137Q96N19 417 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 NYXQ9GZU5 481 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 ZNF665Q9H7R5 613 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 ZNF556Q9HAH1 456 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 NGBQ9NPG2 151 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 FAM212BQ9NTI7 297 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 HACD3Q9P035 362 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 NEDD4P46934 1319 aa4.42□□□□□ -1.7
HMGB1P10-201ENST00000395823 SMCHD1A6NHR9 2005 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 A0A087WZ39 114 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 DENND3A2RUS2 1198 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 TMEM89A2RUT3 159 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 P2RY10O00398 339 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 CPLX1O14810 134 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 IKBKBO14920 756 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 ADAM12O43184 909 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 CYTIPO60759 359 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 SEC24AO95486 1093 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 CPNE6O95741 557 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 PAK4O96013 591 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 IFNB1P01574 187 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 VTNP04004 478 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 EDN1P05305 212 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 F7P08709 466 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 SNHG28P0DPA3 235 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 ANPEPP15144 967 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 ACKR3P25106 362 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 TNFRSF4P43489 277 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 TNNT2P45379 298 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 OR3A2P47893 321 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 HERV-K104P63124 156 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 TMEM132DQ14C87 1099 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 RBBP5Q15291 538 aaKnown RBP4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 ACCSLQ4AC99 568 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 PLPP4Q5VZY2 271 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 UNC5DQ6UXZ4 953 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 CCDC73Q6ZRK6 1079 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 TRMT1LQ7Z2T5 733 aaKnown RBP4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 TCEANCQ8N8B7 351 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 GATAD1Q8WUU5 269 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 LMLNQ96KR4 655 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 C2orf48Q96LS8 159 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 CFAP53Q96M91 514 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 FAM218AQ96MZ4 157 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 SSX3Q99909 188 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 UBAC1Q9BSL1 405 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 CCSER1Q9C0I3 900 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 MTIF3Q9H2K0 278 aaKnown RBP4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 PPANQ9NQ55 473 aaKnown RBP4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 MAN2C1Q9NTJ4 1040 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 ACOXLQ9NUZ1 547 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 RNF186Q9NXI6 227 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 POLKQ9UBT6 870 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 EPHA6Q9UF33 1036 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 NARFQ9UHQ1 456 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 POMT2Q9UKY4 750 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 AURKCQ9UQB9 309 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 MYH14Q7Z406 1995 aaKnown RBP4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 UBE4BO95155 1302 aa4.41□□□□□ -1.7
HMGB1P10-201ENST00000395823 GREB1LQ9C091 1923 aaPredicted RBP4.4□□□□□ -1.7
HMGB1P10-201ENST00000395823 NPC1L1Q9UHC9 1359 aa4.4□□□□□ -1.7
HMGB1P10-201ENST00000395823 SPATA31D1Q6ZQQ2 1576 aa4.4□□□□□ -1.7
HMGB1P10-201ENST00000395823 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 SMIM1B2RUZ4 78 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 ACOT8O14734 319 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 KLF11O14901 512 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 P2RX6O15547 441 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 LRCH4O75427 683 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 TRMUO75648 421 aaKnown RBP4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 CDC123O75794 336 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 AKR7A3O95154 331 aa4.4□□□□□ -1.71
HMGB1P10-201ENST00000395823 CD48P09326 243 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms