RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PRR23D2P0DMB1 279 aaPredicted RBP12.71□□□□□ -0.37
NFKB1-202ENST00000394820 DNAJB1P25685 340 aa12.71□□□□□ -0.37
NFKB1-202ENST00000394820 PTSQ03393 145 aa12.71□□□□□ -0.37
NFKB1-202ENST00000394820 GPAT3Q53EU6 434 aa12.71□□□□□ -0.37
NFKB1-202ENST00000394820 ARTNQ5T4W7 220 aa12.71□□□□□ -0.37
NFKB1-202ENST00000394820 VASH1Q7L8A9 365 aaPredicted RBP12.71□□□□□ -0.37
NFKB1-202ENST00000394820 B3GNT7Q8NFL0 401 aa12.71□□□□□ -0.37
NFKB1-202ENST00000394820 OR6C4Q8NGE1 309 aa12.71□□□□□ -0.37
NFKB1-202ENST00000394820 CIDECQ96AQ7 238 aaPredicted RBP12.71□□□□□ -0.37
NFKB1-202ENST00000394820 GAL3ST1Q99999 423 aa12.71□□□□□ -0.37
NFKB1-202ENST00000394820 NIPSNAP1Q9BPW8 284 aa12.71□□□□□ -0.37
NFKB1-202ENST00000394820 PRPS2P11908 318 aa12.71□□□□□ -0.38
NFKB1-202ENST00000394820 CD70P32970 193 aa12.71□□□□□ -0.38
NFKB1-202ENST00000394820 CASP3P42574 277 aa12.71□□□□□ -0.38
NFKB1-202ENST00000394820 TAS2R50P59544 299 aa12.71□□□□□ -0.38
NFKB1-202ENST00000394820 GCNT6Q5T4J0 391 aa12.71□□□□□ -0.38
NFKB1-202ENST00000394820 TRIM40Q6P9F5 258 aa12.71□□□□□ -0.38
NFKB1-202ENST00000394820 CERS6Q6ZMG9 384 aa12.71□□□□□ -0.38
NFKB1-202ENST00000394820 KCNH6Q9H252 994 aa12.71□□□□□ -0.38
NFKB1-202ENST00000394820 SPEF1Q9Y4P9 236 aa12.71□□□□□ -0.38
NFKB1-202ENST00000394820 FAM47E-STBD1D6RA91 191 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 NEDD8-MDP1E9PL57 170 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 IGLV3-27P01718 113 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 CLEC2LP0C7M8 214 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 C7P10643 843 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 PRPS1L1P21108 318 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 TNFSF8P32971 234 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 PIK3CBP42338 1070 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 CSRP3P50461 194 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 CSTF1Q05048 431 aaKnown RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 GPNMBQ14956 572 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 C16orf62Q7Z3J2 963 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 SNX20Q7Z614 316 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 PTRH1Q86Y79 214 aaKnown RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 LAX1Q8IWV1 398 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 LILRA3Q8N6C8 439 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 SMG7Q92540 1137 aaKnown RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 IL17FQ96PD4 163 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 RHBGQ9H310 441 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 ASF1AQ9Y294 204 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 A0A1W2PQ09 198 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 TEX46H3BTG2 121 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 SMAD9O15198 467 aaKnown RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 CPNE6O95741 557 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 NR2F6P10588 404 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 BPIP17213 487 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 CSTF2P33240 577 aaKnown RBP eCLIP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 SLC19A1P41440 591 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 GRSF1Q12849 480 aaKnown RBP eCLIP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 COX10Q12887 443 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 NXNL2Q5VZ03 156 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 GDPD3Q7L5L3 318 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 GLCCI1Q86VQ1 547 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 ELMOD2Q8IZ81 293 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 TSPEARQ8WU66 669 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 GATAD2BQ8WXI9 593 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 SLC9A6Q92581 669 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 GGHQ92820 318 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 CLP1Q92989 425 aaKnown RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 PLD4Q96BZ4 506 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 RHBDF1Q96CC6 855 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 EID2BQ96D98 161 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 SIRT5Q9NXA8 310 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 CLEC2DQ9UHP7 191 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 CLCA2Q9UQC9 943 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 NYNRINQ9P2P1 1898 aaKnown RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 MIA3Q5JRA6 1907 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 TRBV23OR9-2A0A075B6M9 112 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 C12orf71A8MTZ7 269 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 H3BNC9 293 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 SGTAO43765 313 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 NUAK1O60285 661 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 UGT2B15P54855 530 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 DEFB103AP81534 67 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 CDK6Q00534 326 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 BTBD16Q32M84 506 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 SBSNQ6UWP8 590 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 FAM9CQ8IZT9 166 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 ZNF296Q8WUU4 475 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 C11orf24Q96F05 449 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 TRMT61BQ9BVS5 477 aaKnown RBP12.7□□□□□ -0.38
NFKB1-202ENST00000394820 FNDC11Q9BVV2 318 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 ZNF224Q9NZL3 707 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 IFT52Q9Y366 437 aa12.7□□□□□ -0.38
NFKB1-202ENST00000394820 UPK1AO00322 258 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 LRRTM2O43300 516 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 IFNA14P01570 189 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 IFNA8P32881 189 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 OLR1P78380 273 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 DCST1Q5T197 706 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 GTF2IRD2BQ6EKJ0 949 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 SHQ1Q6PI26 577 aaKnown RBP12.69□□□□□ -0.38
NFKB1-202ENST00000394820 NCEH1Q6PIU2 408 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 PAQR6Q6TCH4 344 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 TMIGD1Q6UXZ0 262 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 GTF2IRD2Q86UP8 949 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 LAPTM4BQ86VI4 370 aa12.69□□□□□ -0.38
NFKB1-202ENST00000394820 TSPYL5Q86VY4 417 aaPredicted RBP12.69□□□□□ -0.38
NFKB1-202ENST00000394820 AMIGO1Q86WK6 493 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms