RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 NIPAL1Q6NVV3 410 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 KLHL17Q6TDP4 642 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 PARS2Q7L3T8 475 aaKnown RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 COMMD6Q7Z4G1 85 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 UTP15Q8TED0 518 aaKnown RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 BTN2A2Q8WVV5 523 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 GTPBP3Q969Y2 492 aaKnown RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 TBC1D20Q96BZ9 403 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 ZNF226Q9NYT6 803 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 SPTBN5Q9NRC6 3674 aaKnown RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 PRAMEF33A0A0G2JMD5 474 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC5A10A0PJK1 596 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 EFCAB9A8MZ26 197 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 H0YIV9 168 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC22A1O15245 554 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC16A5O15375 505 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 PRAMEF10O60809 474 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 DNTTP04053 509 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 IGFBP1P08833 259 aaPredicted RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 DBTP11182 482 aaKnown RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 TIA1P31483 386 aaKnown RBP eCLIP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 MAGEA10P43363 369 aaPredicted RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 FAM78AQ5JUQ0 283 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 COLEC12Q5KU26 742 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 RNF130Q86XS8 419 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 CFAP206Q8IYR0 622 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 GGHQ92820 318 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 PITX2Q99697 317 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC35A5Q9BS91 424 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 DOHHQ9BU89 302 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 MROQ9BYG7 248 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 ROGDIQ9GZN7 287 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 ABCG4Q9H172 646 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 HMG20AQ9NP66 347 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 ITM2CQ9NQX7 267 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 C5AR2Q9P296 337 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 CAB39Q9Y376 341 aaPredicted RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 KIF26AQ9ULI4 1882 aaPredicted RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 LOC100506127A0A0U1RQW1 187 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 E9PQ18 207 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 EIF3FO00303 357 aaPredicted RBP12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 ELFN1P0C7U0 828 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 NPPBP16860 134 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 ST8SIA6P61647 398 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 HIST2H2ACQ16777 129 aaPredicted RBP12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC5A12Q1EHB4 618 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 RPS26P11Q5JNZ5 115 aaPredicted RBP12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 ERICH5Q6P6B1 374 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 MSANTD1Q6ZTZ1 278 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 PRSS48Q7RTY5 328 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 WDR53Q7Z5U6 358 aaPredicted RBP12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 ZBTB8BQ8NAP8 495 aaPredicted RBP12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 OR10G2Q8NGC3 310 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 PSMA8Q8TAA3 256 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 GLYATL1Q969I3 302 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 AP2M1Q96CW1 435 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 OR51E2Q9H255 320 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 PCM1Q15154 2024 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 RTCAO00442 366 aaKnown RBP12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 MYO1DO94832 1006 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 ADH1CP00326 375 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 PTHP01270 115 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 KLK1P06870 262 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 VEZF1Q14119 521 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 PROX2Q3B8N5 592 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 OLIG3Q7RTU3 272 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 TECPR1Q7Z6L1 1165 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 OR56A3Q8NH54 315 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 ITFG2Q969R8 447 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 ZHX1-C8orf76Q96EF9 292 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 VMP1Q96GC9 406 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 HRASLS5Q96KN8 279 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 OR2AG1Q9H205 316 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 DCSTAMPQ9H295 470 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 PALMDQ9NP74 551 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 QPCTLQ9NXS2 382 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 B3GNT3Q9Y2A9 372 aa12.91□□□□□ -0.34
GTF2F1-201ENST00000394456 GOLGA4Q13439 2230 aaKnown RBP12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SERTM1A2A2V5 107 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 TNFRSF21O75509 655 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 RECKO95980 971 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 IMPDH2P12268 514 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 PTGER1P34995 402 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SOAT1P35610 550 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 MMP12P39900 470 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SEPHS1P49903 392 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 TAS2R50P59544 299 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SELENOWP63302 87 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 DGUOKQ16854 277 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 FNDC3BQ53EP0 1204 aaKnown RBP12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 LIPIQ6XZB0 460 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 HMGN2P46Q86SG4 172 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC22A16Q86VW1 577 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 PLD3Q8IV08 490 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC44A2Q8IWA5 706 aaPredicted RBP12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 RBM12BQ8IXT5 1001 aaKnown RBP12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 FAM9CQ8IZT9 166 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 LGI4Q8N135 537 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 CLIP4Q8N3C7 705 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms