RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 DZANK1Q9NVP4 752 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CLDND1Q9NY35 253 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 GLS2Q9UI32 602 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 INTS6Q9UL03 887 aaKnown RBP19.01■□□□□ 0.63
SHANK1-203ENST00000391813 FAM170BA6NMN3 283 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 FLRT2O43155 660 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 AQP9O43315 295 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 GATBO75879 557 aaKnown RBP19.01■□□□□ 0.63
SHANK1-203ENST00000391813 HOXD8P13378 290 aaPredicted RBP19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CELP19835 753 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CFL1P23528 166 aaKnown RBP19.01■□□□□ 0.63
SHANK1-203ENST00000391813 HTR2AP28223 471 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 REEP3Q6NUK4 255 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 LRRN1Q6UXK5 716 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CHST9Q7L1S5 443 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 ADGRG5Q8IZF4 528 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 OR6Q1Q8NGQ2 317 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 RHOXF1Q8NHV9 184 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 MCCC1Q96RQ3 725 aaPredicted RBP19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CYP2S1Q96SQ9 504 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CD244Q9BZW8 370 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 HMX3A6NHT5 357 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF623O75123 536 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 RETP07949 1114 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 ABCB8Q9NUT2 735 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 SIX4Q9UIU6 781 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 SOX14O95416 240 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 AGR2O95994 175 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CTBP2P56545 445 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CXCR4P61073 352 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 EIF4HQ15056 248 aaKnown RBP19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CEACAM20Q6UY09 585 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 GHDCQ8N2G8 530 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CADM2Q8N3J6 435 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 THRSPQ92748 146 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CAP1Q01518 475 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 SERINC3Q13530 473 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 KEAP1Q14145 624 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 XKR4Q5GH76 650 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 ZCCHC12Q6PEW1 402 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 NUDT13Q86X67 352 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 WDTC1Q8N5D0 677 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 L3HYPDHQ96EM0 354 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 BRINP2Q9C0B6 783 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 PHPT1Q9NRX4 125 aaPredicted RBP19■□□□□ 0.63
SHANK1-203ENST00000391813 BCHEP06276 602 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 MAGEA6P43360 314 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 GRSF1Q12849 480 aaKnown RBP eCLIP19■□□□□ 0.63
SHANK1-203ENST00000391813 AGAP7PQ5VUJ5 663 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 ANKRD54Q6NXT1 300 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF676Q8N7Q3 588 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 OSTF1Q92882 214 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 RHBDF1Q96CC6 855 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 LYARQ9NX58 379 aaKnown RBP19■□□□□ 0.63
SHANK1-203ENST00000391813 NDOR1Q9UHB4 597 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 BTAF1O14981 1849 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 TSPAN33Q86UF1 283 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 PDZD9Q8IXQ8 264 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 OR5J2Q8NH18 312 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 EXO5Q9H790 373 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 DCTP40126 519 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 GRK6P43250 576 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 SLC3A1Q07837 685 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 HSDL2Q6YN16 418 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 CEP97Q8IW35 865 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF563Q8TA94 476 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 AIFM2Q9BRQ8 373 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 CDADC1Q9BWV3 514 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 XYLT2Q9H1B5 865 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 NLKQ9UBE8 527 aa19■□□□□ 0.63
SHANK1-203ENST00000391813 H2AFB2P0C5Z0 115 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 PRKACAP17612 351 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 FSHRP23945 695 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 CA5AP35218 305 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 CASP9P55211 416 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 NXPE1Q8N323 547 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 ASB15Q8WXK1 588 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 FIZ1Q96SL8 496 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 POLMQ9NP87 494 aaPredicted RBP18.99■□□□□ 0.63
SHANK1-203ENST00000391813 CYTH4Q9UIA0 394 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 SLC22A14Q9Y267 594 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3DA0A087WVF3 549 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3IA0A087WXS9 549 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3EA0A087X179 549 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3KA0A087X1G2 549 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3FA6NER0 549 aaPredicted RBP18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3LB9A6J9 549 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 SOD2P04179 222 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3HP0C7X1 549 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 GCAP28676 217 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 CPOXP36551 454 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 CRISP1P54107 249 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 GPR17Q13304 367 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 SF1Q15637 639 aaKnown RBP18.99■□□□□ 0.63
SHANK1-203ENST00000391813 GRK1Q15835 563 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 NTRK2Q16620 822 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3GQ6DHY5 549 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3CQ6IPX1 549 aa18.99■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D3Q8IZP1 549 aaPredicted RBP18.99■□□□□ 0.63
SHANK1-203ENST00000391813 ATP6V1C2Q8NEY4 427 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms