RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 THAP4Q8WY91 577 aa18.34■□□□□ 0.53
GTF3A-201ENST00000381140 REPS1Q96D71 796 aa18.34■□□□□ 0.53
GTF3A-201ENST00000381140 MTFMTQ96DP5 389 aaKnown RBP18.34■□□□□ 0.53
GTF3A-201ENST00000381140 CCDC126Q96EE4 140 aa18.34■□□□□ 0.53
GTF3A-201ENST00000381140 SEC16BQ96JE7 1060 aa18.34■□□□□ 0.53
GTF3A-201ENST00000381140 MTERF1Q99551 399 aaKnown RBP18.34■□□□□ 0.53
GTF3A-201ENST00000381140 C14orf105Q9NVL8 296 aa18.34■□□□□ 0.53
GTF3A-201ENST00000381140 IGLV3-12A0A075B6K2 115 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 SAP18O00422 153 aaKnown RBP18.33■□□□□ 0.53
GTF3A-201ENST00000381140 PEX12O00623 359 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 SHOX2O60902 331 aaPredicted RBP18.33■□□□□ 0.53
GTF3A-201ENST00000381140 OTCP00480 354 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 HEXBP07686 556 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 FAM87AP0C7U9 286 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 NEK2P51955 445 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 EMP2P54851 167 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 PHEXP78562 749 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 LINC00303Q3SY05 128 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 MINDY4Q4G0A6 757 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 SGO1Q5FBB7 561 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 FAM219BQ5XKK7 198 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 CPZQ66K79 652 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 TRIM40Q6P9F5 258 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 PPP1R32Q7Z5V6 425 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 L3MBTL4Q8NA19 623 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 RDH11Q8TC12 318 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 APOBEC4Q8WW27 367 aaKnown RBP18.33■□□□□ 0.53
GTF3A-201ENST00000381140 FAM111AQ96PZ2 611 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 UBL7Q96S82 380 aaPredicted RBP18.33■□□□□ 0.53
GTF3A-201ENST00000381140 NTMT1Q9BV86 223 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 C1QTNF3Q9BXJ4 246 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 MS4A8Q9BY19 250 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 OR51B5Q9H339 312 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 CCDC134Q9H6E4 229 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 COPS7BQ9H9Q2 264 aaPredicted RBP18.33■□□□□ 0.53
GTF3A-201ENST00000381140 MKL2Q9ULH7 1088 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 KCNMB2Q9Y691 235 aa18.33■□□□□ 0.53
GTF3A-201ENST00000381140 TNRC6AQ8NDV7 1962 aaKnown RBP18.32■□□□□ 0.52
GTF3A-201ENST00000381140 A0A1B0GTL3 188 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 IDSB3KWA1 339 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 ERVH48-1M5A8F1 160 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 CHST10O43529 356 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 CDC123O75794 336 aaPredicted RBP18.32■□□□□ 0.52
GTF3A-201ENST00000381140 OR4F21O95013 312 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 BMP10O95393 424 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 TBX6O95947 436 aaPredicted RBP18.32■□□□□ 0.52
GTF3A-201ENST00000381140 SMIM10L1P0DMW3 83 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 SERPINB1P30740 379 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 RPS13P62277 151 aaKnown RBP18.32■□□□□ 0.52
GTF3A-201ENST00000381140 TGM3Q08188 693 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 HHATQ5VTY9 493 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 NIPAL1Q6NVV3 410 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 OR2L5Q8NG80 312 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 L3HYPDHQ96EM0 354 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 CMTM7Q96FZ5 175 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 SMIM10Q96HG1 83 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 DMRT3Q9NQL9 472 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 SEMA3GQ9NS98 782 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 P4HTMQ9NXG6 502 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 MID2Q9UJV3 735 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 FAM208BQ5VWN6 2430 aa18.32■□□□□ 0.52
GTF3A-201ENST00000381140 OR2W5A6NFC9 320 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 H0YIV9 168 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 DNAJB5O75953 348 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 IGHEP01854 428 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 MMP11P24347 488 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 RAP1GDS1P52306 607 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 POLE2P56282 527 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 GNGT1P63211 74 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 LY6DQ14210 128 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 CFAP157Q5JU67 520 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 LETMD1Q6P1Q0 360 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 CHSY3Q70JA7 882 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 DYDC1Q8WWB3 177 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 CKAP2Q8WWK9 683 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 MESP1Q9BRJ9 268 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 TGIF2Q9GZN2 237 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 MLXIPLQ9NP71 852 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 ADGRE2Q9UHX3 823 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 HS3ST3B1Q9Y662 390 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 DOCK10Q96BY6 2186 aa18.31■□□□□ 0.52
GTF3A-201ENST00000381140 A0A088AWK7 358 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 MAGEB17A8MXT2 336 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 MASP2O00187 686 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 PSMD12O00232 456 aaPredicted RBP18.3■□□□□ 0.52
GTF3A-201ENST00000381140 RTCAO00442 366 aaKnown RBP18.3■□□□□ 0.52
GTF3A-201ENST00000381140 B3GALT2O43825 422 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 ALOX12BO75342 701 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 ZNF10P21506 573 aaPredicted RBP18.3■□□□□ 0.52
GTF3A-201ENST00000381140 CERS1P27544 350 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 PIK3CBP42338 1070 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 NAGLUP54802 743 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 IFT88Q13099 833 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 ADPRMQ3LIE5 342 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 KHDRBS2Q5VWX1 349 aaKnown RBP18.3■□□□□ 0.52
GTF3A-201ENST00000381140 ABHD17CQ6PCB6 329 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 GPRIN3Q6ZVF9 776 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 C10orf107Q8IVU9 208 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 CDYL2Q8N8U2 506 aa18.3■□□□□ 0.52
GTF3A-201ENST00000381140 C8orf44Q96CB5 159 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms