RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 GLB1P16278 677 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 CDH3P22223 829 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 HIST1H1TP22492 207 aaPredicted RBP18.68■□□□□ 0.58
CCM2-202ENST00000381112 ATP5A1P25705 553 aaKnown RBP18.68■□□□□ 0.58
CCM2-202ENST00000381112 TSFMP43897 325 aaKnown RBP18.68■□□□□ 0.58
CCM2-202ENST00000381112 TRPC1P48995 793 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 ARF3P61204 181 aaPredicted RBP18.68■□□□□ 0.58
CCM2-202ENST00000381112 CCNIQ14094 377 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 TRIM25Q14258 630 aaKnown RBP18.68■□□□□ 0.58
CCM2-202ENST00000381112 DNAJC14Q6Y2X3 702 aaPredicted RBP18.68■□□□□ 0.58
CCM2-202ENST00000381112 MMP21Q8N119 569 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 GAL3ST3Q96A11 431 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 MIEF2Q96C03 454 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 ASB9Q96DX5 294 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 RAB33BQ9H082 229 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 C1GALT1Q9NS00 363 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 GMPR2Q9P2T1 348 aaKnown RBP18.68■□□□□ 0.58
CCM2-202ENST00000381112 EPHA6Q9UF33 1036 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 PCDHB14Q9Y5E9 798 aa18.68■□□□□ 0.58
CCM2-202ENST00000381112 RFXANKO14593 260 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 SH3BP5O60239 455 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 HSD17B1P14061 328 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 DDCP20711 480 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 ALDH4A1P30038 563 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 CDKN2CP42773 168 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 RAB8AP61006 207 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 NR1D2Q14995 579 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 GTDC1Q4AE62 458 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 ANXA8L1Q5VT79 327 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 GATAD2AQ86YP4 633 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 ZCCHC7Q8N3Z6 543 aaKnown RBP18.67■□□□□ 0.58
CCM2-202ENST00000381112 ACOT4Q8N9L9 421 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 C19orf47Q8N9M1 422 aaKnown RBP18.67■□□□□ 0.58
CCM2-202ENST00000381112 CAMKVQ8NCB2 501 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 OR8K5Q8NH50 307 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 RERGQ96A58 199 aaPredicted RBP18.67■□□□□ 0.58
CCM2-202ENST00000381112 PPCDCQ96CD2 204 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 CCDC115Q96NT0 180 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 MAP3K3Q99759 626 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 FAM60AQ9NP50 221 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 ATAD3AQ9NVI7 634 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 BTNL2Q9UIR0 455 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 ERVK-11Q9UQG0 969 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 SLC9B1P1A6NJY1 282 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 PATE3B3GLJ2 98 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 BCAS2O75934 225 aaPredicted RBP18.67■□□□□ 0.58
CCM2-202ENST00000381112 SCELO95171 688 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 GPR3P46089 330 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 EEFSECP57772 596 aaKnown RBP18.67■□□□□ 0.58
CCM2-202ENST00000381112 MTPNP58546 118 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 TGM3Q08188 693 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 SELPLGQ14242 412 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 HEPACAMQ14CZ8 416 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 PRSS53Q2L4Q9 553 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 RUNDC3AQ59EK9 446 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 MRM1Q6IN84 353 aaKnown RBP18.67■□□□□ 0.58
CCM2-202ENST00000381112 ZCCHC8Q6NZY4 707 aaKnown RBP18.67■□□□□ 0.58
CCM2-202ENST00000381112 DGLUCYQ7Z3D6 616 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 TICAM1Q8IUC6 712 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 CLECL1Q8IZS7 167 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 VPS37AQ8NEZ2 397 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 UTP15Q8TED0 518 aaKnown RBP18.67■□□□□ 0.58
CCM2-202ENST00000381112 DUSP23Q9BVJ7 150 aa18.67■□□□□ 0.58
CCM2-202ENST00000381112 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.67■□□□□ 0.58
CCM2-202ENST00000381112 IGHV1OR21-1A0A087WYE8 117 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 RNASET2O00584 256 aaKnown RBP18.66■□□□□ 0.58
CCM2-202ENST00000381112 YKT6O15498 198 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 TBX19O60806 448 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 FAM58BPP0C7Q3 252 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 SMIM10L1P0DMW3 83 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 MYF5P13349 255 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 OR1D5P58170 312 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 SNRPNP63162 240 aaKnown RBP18.66■□□□□ 0.58
CCM2-202ENST00000381112 LIPEQ05469 1076 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 MPEG1Q2M385 716 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 MUM1Q2TAK8 710 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 NKAIN2Q5VXU1 208 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 FAM92BQ6ZTR7 304 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 SMIM10Q96HG1 83 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 PANX1Q96RD7 426 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 PCDHAC1Q9H158 963 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 GAREM1Q9H706 876 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 MIEF1Q9NQG6 463 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 TEX10Q9NXF1 929 aaPredicted RBP18.66■□□□□ 0.58
CCM2-202ENST00000381112 PADI4Q9UM07 663 aa18.66■□□□□ 0.58
CCM2-202ENST00000381112 TP53BP1Q12888 1972 aaPredicted RBP18.66■□□□□ 0.58
CCM2-202ENST00000381112 LAMA1P25391 3075 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 HCRTR1O43613 425 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 KIF1CO43896 1103 aaKnown RBP18.65■□□□□ 0.58
CCM2-202ENST00000381112 GSNP06396 782 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 ZNF888P0CJ79 500 aaPredicted RBP18.65■□□□□ 0.58
CCM2-202ENST00000381112 GSK3BP49841 420 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 ERFP50548 548 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 GFERP55789 205 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 LRRC74AQ0VAA2 488 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 TRAP1Q12931 704 aaKnown RBP18.65■□□□□ 0.58
CCM2-202ENST00000381112 SLAMF1Q13291 335 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 FLOT2Q14254 428 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 SLC9A5Q14940 896 aa18.65■□□□□ 0.58
CCM2-202ENST00000381112 MANEAQ5SRI9 462 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms