RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 HSD17B7P56937 341 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 HSF1Q00613 529 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 HYAL2Q12891 473 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 FRG1Q14331 258 aaKnown RBP21.67■■□□□ 1.06
C9orf47-202ENST00000375850 RBBP5Q15291 538 aaKnown RBP21.67■■□□□ 1.06
C9orf47-202ENST00000375850 CDSNQ15517 529 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 CYP4Z2PQ8N1L4 340 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 CA13Q8N1Q1 262 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 ZFP62Q8NB50 900 aaPredicted RBP21.67■■□□□ 1.06
C9orf47-202ENST00000375850 ASB5Q8WWX0 329 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 GAL3ST3Q96A11 431 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 VMP1Q96GC9 406 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 OSBPL9Q96SU4 736 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 TREX2Q9BQ50 279 aaPredicted RBP21.67■■□□□ 1.06
C9orf47-202ENST00000375850 CCDC77Q9BR77 488 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 MCCC2Q9HCC0 563 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 NECTIN3Q9NQS3 549 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 SLC22A14Q9Y267 594 aa21.67■■□□□ 1.06
C9orf47-202ENST00000375850 TRBV11-1A0A0K0K1C0 115 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 PEX1O43933 1283 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 H2AFYO75367 372 aaKnown RBP21.66■■□□□ 1.06
C9orf47-202ENST00000375850 ZNF37AP17032 561 aaPredicted RBP21.66■■□□□ 1.06
C9orf47-202ENST00000375850 GNAZP19086 355 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 TFEBP19484 476 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 HNF4AP41235 474 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 MSS51Q4VC12 460 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 ARHGAP11AQ6P4F7 1023 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 PAOXQ6QHF9 649 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 FGD2Q7Z6J4 655 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 SULF2Q8IWU5 870 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 CREB3L4Q8TEY5 395 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 CAPS2Q9BXY5 557 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 PITHD1Q9GZP4 211 aaPredicted RBP21.66■■□□□ 1.06
C9orf47-202ENST00000375850 TIMMDC1Q9NPL8 285 aa21.66■■□□□ 1.06
C9orf47-202ENST00000375850 MRPS33Q9Y291 106 aaKnown RBP21.66■■□□□ 1.06
C9orf47-202ENST00000375850 YARS2Q9Y2Z4 477 aaKnown RBP21.66■■□□□ 1.06
C9orf47-202ENST00000375850 USP27XA6NNY8 438 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 ITGA10O75578 1167 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 MYO1DO94832 1006 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 PTGER1P34995 402 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 RCN2Q14257 317 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 MORF4L2Q15014 288 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 TOR1AIP1Q5JTV8 583 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 ADAMTSL2Q86TH1 951 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 SCUBE1Q8IWY4 988 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 EGFL8Q99944 293 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 RHBGQ9H310 441 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 TP63Q9H3D4 680 aaPredicted RBP21.65■■□□□ 1.06
C9orf47-202ENST00000375850 PLSCR2Q9NRY7 297 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 FBXW2Q9UKT8 454 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 OARD1Q9Y530 152 aa21.65■■□□□ 1.06
C9orf47-202ENST00000375850 A0A1B0GTH9 108 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 FOXO6A8MYZ6 492 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 ZFAND5O76080 213 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 TUBB4AP04350 444 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 TPOP07202 933 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 SSR4P51571 173 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 TLE4Q04727 773 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 STEAP4Q687X5 459 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 MEX3BQ6ZN04 569 aaKnown RBP21.64■■□□□ 1.05
C9orf47-202ENST00000375850 RGS9BPQ6ZS82 235 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 SYDE1Q6ZW31 735 aaPredicted RBP21.64■■□□□ 1.05
C9orf47-202ENST00000375850 CD163Q86VB7 1156 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 IGDCC3Q8IVU1 814 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 PDLIM2Q96JY6 352 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 KLHL31Q9H511 634 aa21.64■■□□□ 1.05
C9orf47-202ENST00000375850 F8P00451 2351 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 CSMD2Q7Z408 3487 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 A8MUA0 341 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 BANF1O75531 89 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 C1GALT1C1LP0DN25 315 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 ELK3P41970 407 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 RAB38P57729 211 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 BTN3A2P78410 334 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 CMPK2Q5EBM0 449 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 TMIGD1Q6UXZ0 262 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 C3P1Q6ZMU1 363 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 NCCRP1Q6ZVX7 275 aaPredicted RBP21.63■■□□□ 1.05
C9orf47-202ENST00000375850 FRA10AC1Q70Z53 315 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 CDH24Q86UP0 819 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 ZNF595Q8IYB9 648 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 KLHDC8AQ8IYD2 350 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 KRT78Q8N1N4 520 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 C7orf57Q8NEG2 295 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 VPS39Q96JC1 886 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 NT5DC2Q9H857 520 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 ADAP2Q9NPF8 381 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 PRTFDC1Q9NRG1 225 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 ITGB1BP2Q9UKP3 347 aa21.63■■□□□ 1.05
C9orf47-202ENST00000375850 ANKRD17O75179 2603 aaKnown RBP21.63■■□□□ 1.05
C9orf47-202ENST00000375850 B3GALT2O43825 422 aa21.62■■□□□ 1.05
C9orf47-202ENST00000375850 HS6ST1O60243 411 aa21.62■■□□□ 1.05
C9orf47-202ENST00000375850 CHRNB4P30926 498 aa21.62■■□□□ 1.05
C9orf47-202ENST00000375850 SPNS3Q6ZMD2 512 aa21.62■■□□□ 1.05
C9orf47-202ENST00000375850 TMEM132CQ8N3T6 1108 aa21.62■■□□□ 1.05
C9orf47-202ENST00000375850 CFAP36Q96G28 342 aa21.62■■□□□ 1.05
C9orf47-202ENST00000375850 RUNDC3BQ96NL0 473 aa21.62■■□□□ 1.05
C9orf47-202ENST00000375850 PLAC1Q9HBJ0 212 aa21.62■■□□□ 1.05
C9orf47-202ENST00000375850 POPDC3Q9HBV1 291 aa21.62■■□□□ 1.05
C9orf47-202ENST00000375850 SLC24A3Q9HC58 644 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms