RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 POFUT2Q9Y2G5 429 aa13.55□□□□□ -0.24
CLCNKA-202ENST00000375692 BACE2Q9Y5Z0 518 aa13.55□□□□□ -0.24
CLCNKA-202ENST00000375692 E7EQ34 232 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 ADAMDEC1O15204 470 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 SEMA3DO95025 777 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 SNX4O95219 450 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 CXCR2P25025 360 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 POU1F1P28069 291 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 RPS19P39019 145 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 ETV6P41212 452 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 PXNP49023 591 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 PLD1Q13393 1074 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 OR4A15Q8NGL6 344 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 WDR36Q8NI36 951 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 PIK3R3Q92569 461 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 MCCC1Q96RQ3 725 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 BARHL1Q9BZE3 327 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 TEX28O15482 410 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 NDUFB5O43674 189 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 ABLIM3O94929 683 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 GBAP04062 536 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 ANXA4P09525 319 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 CKMT1AP12532 417 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 ANXA8P13928 327 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 PCGF2P35227 344 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 OLR1P78380 273 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 SMAD3P84022 425 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 DOC2AQ14183 400 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 SLX4IPQ5VYV7 408 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 ZNF544Q6NX49 715 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 TMC5Q6UXY8 1006 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 NPAS3Q8IXF0 933 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 DEPDC4Q8N2C3 294 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 GPR151Q8TDV0 419 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 CRELD1Q96HD1 420 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 OR2B2Q9GZK3 357 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 TRPM5Q9NZQ8 1165 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 ACSL6Q9UKU0 697 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 TMPRSS11EQ9UL52 423 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 CLEC4EQ9ULY5 219 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 RUVBL1Q9Y265 456 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 INSL6Q9Y581 213 aa13.54□□□□□ -0.24
CLCNKA-202ENST00000375692 AGAP14A8MT82 685 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 FAM227AF5H4B4 570 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 TFECO14948 347 aaPredicted RBP13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 PRMT3O60678 531 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 C8GP07360 202 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 IDSP22304 550 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 SOX3P41225 446 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 RFX2P48378 723 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 HNMTP50135 292 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 BAK1Q16611 211 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 ZNF385BQ569K4 471 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 DGKKQ5KSL6 1271 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 CDKL4Q5MAI5 379 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 C9orf50Q5SZB4 431 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 ZNF367Q7RTV3 350 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 NFKBIDQ8NI38 313 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 WDR20Q8TBZ3 569 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 ST6GAL2Q96JF0 529 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 TRNT1Q96Q11 434 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 FAM129BQ96TA1 746 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 TAS2R9Q9NYW1 312 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 TBC1D14Q9P2M4 693 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 CFL2Q9Y281 166 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 CCRL2O00421 344 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 PLK4O00444 970 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 URODP06132 367 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 MVDP53602 400 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 ERVFC1P60507 584 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 MRPS15P82914 257 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 PTSQ03393 145 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 GPR50Q13585 617 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 EIF4HQ15056 248 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 TAB1Q15750 504 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 IFI44LQ53G44 452 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 PTCHD4Q6ZW05 846 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 C17orf50Q8WW18 174 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 MED8Q96G25 268 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 IL4I1Q96RQ9 567 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 TTYH2Q9BSA4 534 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 ASPNQ9BXN1 380 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 ZNF556Q9HAH1 456 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 SMURF1Q9HCE7 757 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 PLSCR3Q9NRY6 295 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 SPATA6Q9NWH7 488 aaPredicted RBP13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 CLEC2DQ9UHP7 191 aa13.53□□□□□ -0.24
CLCNKA-202ENST00000375692 UNC80Q8N2C7 3258 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 SCN8AQ9UQD0 1980 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 REV3LO60673 3130 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 WWP2O00308 870 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 ZNF821O75541 412 aaPredicted RBP13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 SLITRK5O94991 958 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 OR56A5P0C7T3 313 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 LHCGRP22888 699 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 CNR2P34972 360 aa13.52□□□□□ -0.24
CLCNKA-202ENST00000375692 HBA1P69905 142 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms