RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 STARD8Q92502 1023 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 AURKBQ96GD4 344 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 ITCHQ96J02 903 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 CCDC115Q96NT0 180 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 TRAPPC9Q96Q05 1148 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 SLC38A3Q99624 504 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 ZFYVE21Q9BQ24 234 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 TRIM4Q9C037 500 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 SEMA6CQ9H3T2 930 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 RNPEPL1Q9HAU8 725 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 IL21RQ9HBE5 538 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 SUSD2Q9UGT4 822 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 KMT2EQ8IZD2 1858 aa14.93□□□□□ -0.02
NIPAL3-204ENST00000374399 PRSS51A0A1B0GVH4 220 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 PATE3B3GLJ2 98 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 H0YGG7 62 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 CASC3O15234 703 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 KIF1CO43896 1103 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 CTSBP07858 339 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 SP9P0CG40 484 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 HIST1H1TP22492 207 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ATP5A1P25705 553 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ATXN3P54252 364 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 EEFSECP57772 596 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ARF3P61204 181 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 LIPEQ05469 1076 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 KLC1Q07866 573 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 SLC14A1Q13336 389 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 DUOXA1Q1HG43 343 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 C6orf163Q5TEZ5 329 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 RNF111Q6ZNA4 994 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ZNF551Q7Z340 670 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 GPR155Q7Z3F1 870 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ARL10Q8N8L6 244 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 OR8K5Q8NH50 307 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 UTP15Q8TED0 518 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 SAP25Q8TEE9 199 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 CIDECQ96AQ7 238 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 QRFPRQ96P65 431 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 CPPED1Q9BRF8 314 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 BHLHE41Q9C0J9 482 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 RMND5AQ9H871 391 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 CAPN10Q9HC96 672 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 MAPRE3Q9UPY8 281 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 WBP11Q9Y2W2 641 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ASB4Q9Y574 426 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 RP1P56715 2156 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 WDR87Q6ZQQ6 2873 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 C15orf38-AP3S2A0A0A6YYH1 394 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 H0Y3Z8 333 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 TBX19O60806 448 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 SCELO95171 688 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 DDCP20711 480 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 TRPC1P48995 793 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ARRB1P49407 418 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 GZMMP51124 257 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 GFERP55789 205 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 RAB8AP61006 207 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 CFHR1Q03591 330 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 FLOT2Q14254 428 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 HLA-BQ31612 363 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ZNF528Q3MIS6 628 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 SPATS1Q496A3 300 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 NKAIN2Q5VXU1 208 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 BMP8AQ7Z5Y6 402 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ARPINQ7Z6K5 226 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 GATAD2AQ86YP4 633 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 TICAM1Q8IUC6 712 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ACOT4Q8N9L9 421 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 HIPK4Q8NE63 616 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 DNAJB8Q8NHS0 232 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 MTERF3Q96E29 417 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 THAP11Q96EK4 314 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ZNF583Q96ND8 569 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 KCNC2Q96PR1 638 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 PHF12Q96QT6 1004 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 MAP3K3Q99759 626 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 TBCDQ9BTW9 1192 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ALG2Q9H553 416 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 ZSCAN32Q9NX65 697 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 SH3BP4Q9P0V3 963 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 LRIT1Q9P2V4 623 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 BTNL2Q9UIR0 455 aa14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 MRPS2Q9Y399 296 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-204ENST00000374399 LY6G6EA0A0G2JKS1 128 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 C1orf226A1L170 272 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 SLC9B1P1A6NJY1 282 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 H3BNX3 289 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 RNASET2O00584 256 aaKnown RBP14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 RFXANKO14593 260 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 NUDT21O43809 227 aaKnown RBP14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 ZNF888P0CJ79 500 aaPredicted RBP14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 ATP6V1B2P21281 511 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 CERS1P27544 350 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 AVPR2P30518 371 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 CNR2P34972 360 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 SSR2P43308 183 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 EPHA4P54764 986 aa14.91□□□□□ -0.02
NIPAL3-204ENST00000374399 TRA2BP62995 288 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms