RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TRBC2A0A5B9 178 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ARPC2O15144 300 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 HMGN1P05114 100 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 H1F0P07305 194 aaKnown RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 LMAN2Q12907 356 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 RTP2Q5QGT7 225 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 GPRIN1Q7Z2K8 1008 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 NUDT13Q86X67 352 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 OR5T1Q8NG75 326 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 SLC22A18Q96BI1 424 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 TTYH3Q9C0H2 523 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 DZANK1Q9NVP4 752 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 RHCGQ9UBD6 479 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 KCNN3Q9UGI6 736 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 CFL2Q9Y281 166 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ITM2AO43736 263 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ECI2O75521 394 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 MRPL3P09001 348 aaKnown RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 HSD17B2P37059 387 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 PTGIRP43119 386 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 ENTPD1P49961 510 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 NCEH1Q6PIU2 408 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 TXNDC5Q8NBS9 432 aaKnown RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 GLB1L3Q8NCI6 653 aaPredicted RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 TFGQ92734 400 aaPredicted RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 MR1Q95460 341 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 NUSAP1Q9BXS6 441 aaKnown RBP13.84□□□□□ -0.19
TRAF1-201ENST00000373887 LRRC3Q9BY71 257 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 FLRT1Q9NZU1 646 aa13.84□□□□□ -0.19
TRAF1-201ENST00000373887 MEIS3P2A8K0S8 358 aa13.83□□□□□ -0.19
TRAF1-201ENST00000373887 MAGEA8P43361 318 aa13.83□□□□□ -0.19
TRAF1-201ENST00000373887 NADK2Q4G0N4 442 aa13.83□□□□□ -0.19
TRAF1-201ENST00000373887 CCDC58Q4VC31 144 aa13.83□□□□□ -0.19
TRAF1-201ENST00000373887 TUBA3EQ6PEY2 450 aa13.83□□□□□ -0.19
TRAF1-201ENST00000373887 DNM1P34Q6PK57 102 aa13.83□□□□□ -0.19
TRAF1-201ENST00000373887 RPS27LQ71UM5 84 aaKnown RBP13.83□□□□□ -0.19
TRAF1-201ENST00000373887 GALNT12Q8IXK2 581 aa13.83□□□□□ -0.19
TRAF1-201ENST00000373887 MAPK15Q8TD08 544 aa13.83□□□□□ -0.19
TRAF1-201ENST00000373887 DCAKDQ8WVC6 231 aa13.83□□□□□ -0.19
TRAF1-201ENST00000373887 CLIC1O00299 241 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 TGM5O43548 720 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 GABBR2O75899 941 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 HTR1AP08908 422 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF14P17017 642 aaPredicted RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 SMSP52788 366 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 DGKQP52824 942 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 C7orf34Q96L11 122 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 KLHL15Q96M94 604 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 M0R2N6 131 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 PEX12O00623 359 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 PTP4A2Q12974 167 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 SLC2A7Q6PXP3 512 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 OR10T2Q8NGX3 314 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF599Q96NL3 588 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 GRHPRQ9UBQ7 328 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 B4GALT6Q9UBX8 382 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 LOC100130705A0A1B0GUX0 176 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 GRXCR2A6NFK2 248 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF705EA8MWA4 302 aaPredicted RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 RAB36O95755 333 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 MFSD8Q8NHS3 518 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 GEMIN6Q8WXD5 167 aaKnown RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 TSACCQ96A04 125 aaPredicted RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 RGMAQ96B86 450 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 HSPBAP1Q96EW2 488 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF514Q96K75 400 aaPredicted RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 HSPA12BQ96MM6 686 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 METTL7AQ9H8H3 244 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 DKKL1Q9UK85 242 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 POFUT2Q9Y2G5 429 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 PIRO00625 290 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 GABRDO14764 452 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 TLX2O43763 284 aaPredicted RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 PEPDP12955 493 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 CSNK2A2P19784 350 aaPredicted RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 PXNP49023 591 aaPredicted RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 RHDQ02161 417 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 LAPTM4AQ15012 233 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 SWT1Q5T5J6 900 aaKnown RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 THOC6Q86W42 341 aaKnown RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 TDRPQ86YL5 185 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 SAMD14Q8IZD0 417 aaPredicted RBP13.83□□□□□ -0.2
TRAF1-201ENST00000373887 LRRC58Q96CX6 371 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 CAMK1GQ96NX5 476 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 TM9SF3Q9HD45 589 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 FTSJ1Q9UET6 329 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 HCN2Q9UL51 889 aa13.83□□□□□ -0.2
TRAF1-201ENST00000373887 NID2Q14112 1375 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 A0A1B0GV50 99 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 A0A1B0GVI7 797 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 DUXAA6NLW8 204 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 B8ZZF3 427 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 RPS3P23396 243 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRAF1-201ENST00000373887 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM139Q8IV31 216 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 PHOSPHO1Q8TCT1 267 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 SCGB1C1Q8TD33 95 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 PLEKHO2Q8TD55 490 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 ADAMTS10Q9H324 1103 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 OR51I1Q9H343 314 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms