RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 CCKARP32238 428 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 ACVR1BP36896 505 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 PIGAP37287 484 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 GEMP55040 296 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 UBXN1Q04323 297 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 CRYZQ08257 329 aaKnown RBP11.25□□□□□ -0.61
HDAC8-204ENST00000373560 FAM174BQ3ZCQ3 159 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 DCST1Q5T197 706 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 ICE2Q659A1 982 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 C22orf34Q6ZV56 151 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 FAM47EQ6ZV65 393 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 PLEKHM3Q6ZWE6 761 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 MEX3DQ86XN8 651 aaKnown RBP11.25□□□□□ -0.61
HDAC8-204ENST00000373560 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.25□□□□□ -0.61
HDAC8-204ENST00000373560 NEIL3Q8TAT5 605 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 TMEM171Q8WVE6 324 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 ASB15Q8WXK1 588 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 HAUS1Q96CS2 278 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 PTCHD1Q96NR3 888 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 RASL10BQ96S79 203 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 BEX2Q9BXY8 128 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 SPTLC3Q9NUV7 552 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 ATG4BQ9Y4P1 393 aa11.25□□□□□ -0.61
HDAC8-204ENST00000373560 A0A096LNT2 108 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 TCRBV16S1A1N1A0A5B0 115 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 CCDC162PA2VCL2 907 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 MBD3L3A6NE82 208 aaPredicted RBP11.24□□□□□ -0.61
HDAC8-204ENST00000373560 SERINC4A6NH21 518 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 WWP2O00308 870 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 MYO1DO94832 1006 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 PLAUP00749 431 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 CRYGSP22914 178 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 MSNP26038 577 aaKnown RBP11.24□□□□□ -0.61
HDAC8-204ENST00000373560 AOAHP28039 575 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 RPA3P35244 121 aaPredicted RBP11.24□□□□□ -0.61
HDAC8-204ENST00000373560 CPA2P48052 419 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 CLCN2P51788 898 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 NSUN5P2Q63ZY6 315 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 APTXQ7Z2E3 356 aaKnown RBP11.24□□□□□ -0.61
HDAC8-204ENST00000373560 B3GNT7Q8NFL0 401 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 MBD3L2Q8NHZ7 208 aaPredicted RBP11.24□□□□□ -0.61
HDAC8-204ENST00000373560 NCLNQ969V3 563 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 OR1F2PQ96R84 312 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 TRIB1Q96RU8 372 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 ANKHQ9HCJ1 492 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 ZNHIT6Q9NWK9 470 aaKnown RBP11.24□□□□□ -0.61
HDAC8-204ENST00000373560 SPATA7Q9P0W8 599 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 YARS2Q9Y2Z4 477 aaKnown RBP11.24□□□□□ -0.61
HDAC8-204ENST00000373560 DYRK1BQ9Y463 629 aa11.24□□□□□ -0.61
HDAC8-204ENST00000373560 MED12LQ86YW9 2145 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 MED12Q93074 2177 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 ZNF487B1APH4 448 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 TGFBR3LH3BV60 316 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 TXNDC9O14530 226 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 KRT1P04264 644 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 TMIGD3P0DMS9 266 aaPredicted RBP11.23□□□□□ -0.61
HDAC8-204ENST00000373560 CPOXP36551 454 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 GMPRP36959 345 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 COILP38432 576 aaPredicted RBP11.23□□□□□ -0.61
HDAC8-204ENST00000373560 SLCO1A2P46721 670 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 GPR143P51810 404 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 DEFA6Q01524 100 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 PRDX1Q06830 199 aaKnown RBP11.23□□□□□ -0.61
HDAC8-204ENST00000373560 FAM27E3Q08E93 113 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 KLHL30Q0D2K2 578 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 NAA25Q14CX7 972 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 RNF187Q5TA31 235 aaPredicted RBP11.23□□□□□ -0.61
HDAC8-204ENST00000373560 MFSD7Q6UXD7 560 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 OTOAQ7RTW8 1153 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 ZNF550Q7Z398 422 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 LDB1Q86U70 411 aaPredicted RBP11.23□□□□□ -0.61
HDAC8-204ENST00000373560 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
HDAC8-204ENST00000373560 FBXO15Q8NCQ5 510 aaPredicted RBP11.23□□□□□ -0.61
HDAC8-204ENST00000373560 MCOLN3Q8TDD5 553 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 ANKRD9Q96BM1 317 aaPredicted RBP11.23□□□□□ -0.61
HDAC8-204ENST00000373560 TBC1D20Q96BZ9 403 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 HSPBAP1Q96EW2 488 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 QKIQ96PU8 341 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■■■■□ 25.6
HDAC8-204ENST00000373560 SH2B3Q9UQQ2 575 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 PCDHGB3Q9Y5G1 929 aa11.23□□□□□ -0.61
HDAC8-204ENST00000373560 C15orf38-AP3S2A0A0A6YYH1 394 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 AHRRA9YTQ3 701 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 H7BY64 318 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 CHST10O43529 356 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 ADAM11O75078 769 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 NDUFS7O75251 213 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 LRATO95237 230 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 APOA4P06727 396 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 PKMP14618 531 aaKnown RBP11.22□□□□□ -0.61
HDAC8-204ENST00000373560 OPRM1P35372 400 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 MC3RP41968 323 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 POU6F1Q14863 301 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 TBCELQ5QJ74 424 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 LCE2CQ5TA81 110 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 C12orf54Q6X4T0 127 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 RTL4Q6ZR62 310 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 DNM1P46Q6ZS02 220 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 CCDC50Q8IVM0 306 aa11.22□□□□□ -0.61
HDAC8-204ENST00000373560 ZNF441Q8N8Z8 693 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms