RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 PCGF2P35227 344 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 BCL6P41182 706 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 PPP1R8Q12972 351 aaKnown RBP18.68■□□□□ 0.58
HDAC1-201ENST00000373548 ANGPTL8Q6UXH0 198 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 EIF3MQ7L2H7 374 aaKnown RBP18.68■□□□□ 0.58
HDAC1-201ENST00000373548 NUDT13Q86X67 352 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 FBXL6Q8N531 539 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 TRIML2Q8N7C3 387 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 OR2L3Q8NG85 312 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 OR52N2Q8NGI0 321 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 QRFPRQ96P65 431 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 ABCG4Q9H172 646 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 RAPGEFL1Q9UHV5 662 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 FAF1Q9UNN5 650 aaPredicted RBP18.68■□□□□ 0.58
HDAC1-201ENST00000373548 MYRFQ9Y2G1 1151 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 WBP11Q9Y2W2 641 aaKnown RBP18.68■□□□□ 0.58
HDAC1-201ENST00000373548 COLEC10Q9Y6Z7 277 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 GOLGA4Q13439 2230 aaKnown RBP18.68■□□□□ 0.58
HDAC1-201ENST00000373548 LRP4O75096 1905 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 FANCMQ8IYD8 2048 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 MDC1Q14676 2089 aaKnown RBP18.68■□□□□ 0.58
HDAC1-201ENST00000373548 TMPRSS11DO60235 418 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 TNFRSF21O75509 655 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 HPRP00739 348 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 SERPIND1P05546 499 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 ETFAP13804 333 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 ATP6V1B1P15313 513 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 DCTP40126 519 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 CRATP43155 626 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 CRYBA2P53672 197 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 CASP9P55211 416 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 ABATP80404 500 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 FAM180BQ6P0A1 224 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 WASH2PQ6VEQ5 465 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 USP51Q70EK9 711 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 VTCN1Q7Z7D3 282 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 FLCNQ8NFG4 579 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 SDCCAG3Q96C92 435 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 RMND5BQ96G75 393 aaPredicted RBP18.68■□□□□ 0.58
HDAC1-201ENST00000373548 TMEM168Q9H0V1 697 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 CAAP1Q9H8G2 361 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 SMURF2Q9HAU4 748 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 IL1RAPQ9NPH3 570 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 TMEM184CQ9NVA4 438 aa18.68■□□□□ 0.58
HDAC1-201ENST00000373548 ZNF624Q9P2J8 865 aaPredicted RBP18.68■□□□□ 0.58
HDAC1-201ENST00000373548 PPM1DO15297 605 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 TBX19O60806 448 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 HOXB3P14651 431 aaPredicted RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 RPL5P46777 297 aaKnown RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 SPESP1Q6UW49 350 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 SATL1Q86VE3 508 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 AMER3Q8N944 861 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 TMEM145Q8NBT3 493 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 C11orf65Q8NCR3 313 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 TTLQ8NG68 377 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 OR5AK3PQ8NH89 298 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 OR5K1Q8NHB7 308 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 HSH2DQ96JZ2 352 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 DPH7Q9BTV6 452 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 OSBPL10Q9BXB5 764 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 YIPF3Q9GZM5 350 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 DDX31Q9H8H2 851 aaKnown RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 VNN3Q9NY84 501 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 ADAM29Q9UKF5 820 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 PCOLCE2Q9UKZ9 415 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 ABCG2Q9UNQ0 655 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 LRIT2A6NDA9 550 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 C10orf142B7Z368 130 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 HAT1O14929 419 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 MBTPS2O43462 519 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 GCM2O75603 506 aaPredicted RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 SEMA4FO95754 770 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 ALBP02768 609 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 PABPC4LP0CB38 370 aaKnown RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 THRBP10828 461 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 PPP2R2BQ00005 443 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 MYBPC3Q14896 1274 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 ZIC1Q15915 447 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 ZIK1Q3SY52 487 aaPredicted RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 SLC30A9Q6PML9 568 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 OFCC1Q8IZS5 231 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 TEFMQ96QE5 360 aaKnown RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 TMEM121BQ9BXQ6 578 aaPredicted RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 SLAMF7Q9NQ25 335 aa18.67■□□□□ 0.58
HDAC1-201ENST00000373548 USP36Q9P275 1121 aaKnown RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 NDRG2Q9UN36 371 aaKnown RBP18.67■□□□□ 0.58
HDAC1-201ENST00000373548 A0A0G2JN53 185 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 H0YAE9 185 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 TNFRSF10CO14798 259 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 KDM1AO60341 852 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 RASGRP1O95267 797 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 STATHP02808 62 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 AKT2P31751 481 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 ACTR1BP42025 376 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 ALDH9A1P49189 494 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 PLA2G16P53816 162 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 ACTR1AP61163 376 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 LRRC32Q14392 662 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 HEPACAMQ14CZ8 416 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 SLC5A12Q1EHB4 618 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms