RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 NEUROD4Q9HD90 331 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 RABL2AQ9UBK7 228 aaPredicted RBP13.73□□□□□ -0.21
LMX1B-202ENST00000373474 UTS2RQ9UKP6 389 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 RABL2BQ9UNT1 228 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 LOC100509620A0A075B734 347 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 MATN1P21941 496 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 CREB5Q02930 508 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 C6orf136Q5SQH8 315 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 BAIAP2L2Q6UXY1 529 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 OR10Q1Q8NGQ4 319 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 BRI3BPQ8WY22 251 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 S100A16Q96FQ6 103 aaKnown RBP13.73□□□□□ -0.21
LMX1B-202ENST00000373474 TMEM246Q9BRR3 403 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 TRMT61BQ9BVS5 477 aaKnown RBP13.73□□□□□ -0.21
LMX1B-202ENST00000373474 STRA6Q9BX79 667 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 CCDC88AQ3V6T2 1871 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 C6orf47O95873 294 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 GRB7Q14451 532 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 TMED9Q9BVK6 235 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 PRSS51A0A1B0GVH4 220 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 FAM170BA6NMN3 283 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 UPK3BL1B0FP48 263 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 UPK3BL2E5RIL1 263 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 IGFBP4P22692 258 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 DIO3P55073 304 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF767PQ75MW2 155 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 NLGN2Q8NFZ4 835 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 SLC22A18Q96BI1 424 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 WDR26Q9H7D7 661 aa13.73□□□□□ -0.21
LMX1B-202ENST00000373474 A0A0G2JN53 185 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 OR2B3O76000 313 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 EDNRAP25101 427 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 MAPK3P27361 379 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-202ENST00000373474 PUM1Q14671 1186 aaKnown RBP eCLIP13.72□□□□□ -0.21
LMX1B-202ENST00000373474 ATAT1Q5SQI0 421 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 TMEM135Q86UB9 458 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 DCAF4L2Q8NA75 395 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 SLC5A11Q8WWX8 675 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 CCDC120Q96HB5 630 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 MUS81Q96NY9 551 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 NDC1Q9BTX1 674 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 PRRG4Q9BZD6 226 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 TAS2R10Q9NYW0 307 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 TAC3Q9UHF0 121 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 SSX4O60224 188 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 SNAP29O95721 258 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 CLIC3O95833 236 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 INHAP05111 366 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 CTC1Q2NKJ3 1217 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 PLEKHS1Q5SXH7 462 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 XKR5Q6UX68 686 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 TMEM203Q969S6 136 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 ELOA3DA6NLF2 546 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-202ENST00000373474 CLDN10P78369 228 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 MAD2L1BPQ15013 274 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-202ENST00000373474 UPP1Q16831 310 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 ELOA3BQ3SY89 546 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 KANK2Q63ZY3 851 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 SLC36A4Q6YBV0 504 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 NUP54Q7Z3B4 507 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 LRRTM4Q86VH4 590 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 MINDY1Q8N5J2 469 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.72□□□□□ -0.21
LMX1B-202ENST00000373474 MFSD2AQ8NA29 543 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 ELOA3Q8NG57 546 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 MFSD8Q8NHS3 518 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 PRR11Q96HE9 360 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-202ENST00000373474 OR5B12Q96R08 314 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 C13orf42A0A1B0GVH6 325 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 NDUFS4O43181 175 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 VAMP1P23763 118 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 TAS2R50P59544 299 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 GPR17Q13304 367 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 AGTRAPQ6RW13 159 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF367Q7RTV3 350 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 FBXO15Q8NCQ5 510 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-202ENST00000373474 METTL21AQ8WXB1 218 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 RTP4Q96DX8 246 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 NSUN5Q96P11 429 aaKnown RBP13.72□□□□□ -0.21
LMX1B-202ENST00000373474 KCNN3Q9UGI6 736 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 HCN4Q9Y3Q4 1203 aa13.72□□□□□ -0.21
LMX1B-202ENST00000373474 XPNPEP2O43895 674 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 S1PR4O95977 384 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 GKN3PP0CG01 181 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 PRKACAP17612 351 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 TUBG1P23258 451 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ENTPD1P49961 510 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 PPIGQ13427 754 aaKnown RBP eCLIP13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ALG1LQ6GMV1 187 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF598Q86UK7 904 aaKnown RBP13.71□□□□□ -0.21
LMX1B-202ENST00000373474 GOLM1Q8NBJ4 401 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 GRHL3Q8TE85 626 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 CYB5D2Q8WUJ1 264 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 SCRN2Q96FV2 425 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 AIG1Q9NVV5 245 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 COPS7AQ9UBW8 275 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 MGAT4BQ9UQ53 548 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 PLEKHA6Q9Y2H5 1048 aa13.71□□□□□ -0.21
LMX1B-202ENST00000373474 A0A0D9SEW6 157 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms