RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 EPGNQ6UW88 154 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 FRRS1Q6ZNA5 592 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR14K1Q8NGZ2 314 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 HSPBAP1Q96EW2 488 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 CMTM7Q96FZ5 175 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 BORCS6Q96GS4 357 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 PIWIL1Q96J94 861 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 POLR2J2Q9GZM3 115 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 MRM3Q9HC36 420 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 PREBQ9HCU5 417 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 COMMD3Q9UBI1 195 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 SETD1AO15047 1707 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 M0QZQ0 153 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 DCLK1O15075 740 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 NPC1O15118 1278 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 TDGQ13569 410 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 STK11Q15831 433 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPR139Q6DWJ6 353 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 SKA3Q8IX90 412 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF487B1APH4 448 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 B8ZZF3 427 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 RAB3DO95716 219 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC2A2P11168 524 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 HOXC12P31275 282 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 CBX5P45973 191 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 CHAF1BQ13112 559 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 WSCD2Q2TBF2 565 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 SPATS1Q496A3 300 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 CLVS2Q5SYC1 327 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 TPRG1LQ5T0D9 272 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 THOC6Q86W42 341 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 TMBIM1Q969X1 311 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 CASD1Q96PB1 797 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR52B2Q96RD2 323 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 SUSD2Q9UGT4 822 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 SERTAD3Q9UJW9 196 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 SFT2D3Q587I9 215 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC22A16Q86VW1 577 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 ATCAYQ86WG3 371 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 SPARTQ8N0X7 666 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 PQLC3Q8N755 202 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPR151Q8TDV0 419 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 IGSF8Q969P0 613 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 SMURF2Q9HAU4 748 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 TVP23BQ9NYZ1 205 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 A0A0G2JN53 185 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF705EA8MWA4 302 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 PRSS44E7EML9 344 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 CPNE3O75131 537 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 TCEA1P23193 301 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 DNAJB1P25685 340 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 DEFB103AP81534 67 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 PRRT3Q5FWE3 981 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 ARHGAP40Q5TG30 622 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 DNAAF1Q8NEP3 725 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR10G2Q8NGC3 310 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 C12orf43Q96C57 262 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 PEX12O00623 359 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 TGFB1P01137 390 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF35P13682 527 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 PRKCHP24723 683 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 NRLP54845 237 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 KLF1Q13351 362 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 MPP7Q5T2T1 576 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 RAB12Q6IQ22 244 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 ERMP1Q7Z2K6 904 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 KCTD7Q96MP8 289 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZIM2Q9NZV7 527 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC17A6Q9P2U8 582 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 EXOGQ9Y2C4 368 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 KCTD3Q9Y597 815 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR6C70A6NIJ9 312 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 MEIS3P2A8K0S8 358 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 TTC34A8MYJ7 566 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 ERI3O43414 337 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 RSL1D1O76021 490 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 CLPXO76031 633 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 PRH1P02810 166 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 JMJD7P0C870 316 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 EPCAMP16422 314 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 ACSL1P33121 698 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 TOR1AIP1Q5JTV8 583 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 CORO2AQ92828 525 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
RAPGEF1-201ENST00000372189 CAPN14A8MX76 684 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 CXorf49A8MYA2 514 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 BCAS2O75934 225 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 IL33O95760 270 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 IFNA17P01571 189 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 CLCN4P51793 760 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 OC90Q02509 493 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 TMEM115Q12893 351 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 SP140Q13342 867 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF598Q86UK7 904 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF283Q8N7M2 679 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 TXNDC5Q8NBS9 432 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 TRIM2Q9C040 744 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 AKTIPQ9H8T0 292 aa12.86□□□□□ -0.35
RAPGEF1-201ENST00000372189 A8MUA0 341 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms