RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TBC1D20Q96BZ9 403 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 PHF21BQ96EK2 531 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 THOC3Q96J01 351 aaKnown RBP9.29□□□□□ -0.92
CD48-202ENST00000368046 IMMP1LQ96LU5 166 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 AGAP4Q96P64 663 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 LMF1Q96S06 567 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 TUBB6Q9BUF5 446 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 REXO4Q9GZR2 422 aaKnown RBP9.29□□□□□ -0.92
CD48-202ENST00000368046 AICDAQ9GZX7 198 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 MRPL46Q9H2W6 279 aaKnown RBP9.29□□□□□ -0.92
CD48-202ENST00000368046 IPPKQ9H8X2 491 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 LANCL2Q9NS86 450 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 RIC8BQ9NVN3 520 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 C19orf25Q9UFG5 118 aaPredicted RBP9.29□□□□□ -0.92
CD48-202ENST00000368046 DCDC2Q9UHG0 476 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 PCDHGA11Q9Y5H2 935 aa9.29□□□□□ -0.92
CD48-202ENST00000368046 BOD1L1Q8NFC6 3051 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 LRRC14BA6NHZ5 514 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 MAGEB17A8MXT2 336 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 ESPNB1AK53 854 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 PSMD12O00232 456 aaPredicted RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 E2F3O00716 465 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 ERI3O43414 337 aaKnown RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 PRMT3O60678 531 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 UGDHO60701 494 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 B4GALT2O60909 372 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 SIX3O95343 332 aaPredicted RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 SLU7O95391 586 aaKnown RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 SERPINA7P05543 415 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 SBK3P0C264 359 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 RNH1P13489 461 aaKnown RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 SERPINB1P30740 379 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 HNRNPH1P31943 449 aaKnown RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 PIK3CBP42338 1070 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 PLA2G16P53816 162 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 AP2B1P63010 937 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 OLR1P78380 273 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 RHAGQ02094 409 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 ACTN3Q08043 901 aaPredicted RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 TGM3Q08188 693 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 RUNX2Q13950 521 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 PCOLCEQ15113 449 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 TMEM35AQ53FP2 167 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 DEPDC1Q5TB30 811 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 GRHL2Q6ISB3 625 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 JMJD6Q6NYC1 403 aaPredicted RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 TRIM40Q6P9F5 258 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 IGFL2Q6UWQ7 119 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 ANKRD37Q7Z713 158 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 GSPT2Q8IYD1 628 aaKnown RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 ZADH2Q8N4Q0 377 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 RBMXL3Q8N7X1 1067 aaKnown RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 PTGR2Q8N8N7 351 aaPredicted RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 UBLCP1Q8WVY7 318 aaPredicted RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 PSMF1Q92530 271 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 ATP6V1E2Q96A05 226 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 CMTM7Q96FZ5 175 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 PTCHD1Q96NR3 888 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 QRFPRQ96P65 431 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 F2RL3Q96RI0 385 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 SERINC2Q96SA4 455 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 TBCDQ9BTW9 1192 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 NTMT1Q9BV86 223 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 ROGDIQ9GZN7 287 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 ACTR8Q9H981 624 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 PPCSQ9HAB8 311 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 PRDM7Q9NQW5 492 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 PSD3Q9NYI0 1048 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 TMEM216Q9P0N5 145 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 PSMC3IPQ9P2W1 217 aaPredicted RBP9.28□□□□□ -0.92
CD48-202ENST00000368046 XPR1Q9UBH6 696 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 TBK1Q9UHD2 729 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 TSC22D4Q9Y3Q8 395 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 HEATR5BQ9P2D3 2071 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 PCSK5Q92824 1860 aa9.28□□□□□ -0.92
CD48-202ENST00000368046 ZNF462Q96JM2 2506 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 FAM181BA6NEQ2 426 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 TTLL8A6PVC2 850 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 C4orf51C9J302 202 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 FAM227AF5H4B4 570 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 H0YIV9 168 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 CLDN4O14493 209 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 B3GALT2O43825 422 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 CDC123O75794 336 aaPredicted RBP9.27□□□□□ -0.93
CD48-202ENST00000368046 CLDN9O95484 217 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 TGFB1P01137 390 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 SHBGP04278 402 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 GSTA1P08263 222 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 PRR35P0CG20 571 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 PCNAP12004 261 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 TAC1P20366 129 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 PTX3P26022 381 aaPredicted RBP9.27□□□□□ -0.93
CD48-202ENST00000368046 EEF1DP29692 281 aaKnown RBP9.27□□□□□ -0.93
CD48-202ENST00000368046 ARFIP1P53367 373 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 MTTPP55157 894 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 TLE1Q04724 770 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 EEF1A2Q05639 463 aaKnown RBP9.27□□□□□ -0.93
CD48-202ENST00000368046 ABRAXAS2Q15018 415 aa9.27□□□□□ -0.93
CD48-202ENST00000368046 RASA2Q15283 850 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms