RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 THRBP10828 461 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 GABRR2P28476 465 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 SHMT2P34897 504 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 POLR2IP36954 125 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 KRT6CP48668 564 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 STK19P49842 368 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 HNRNPFP52597 415 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 SNRPD1P62314 119 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 PPP2R2BQ00005 443 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 GRSF1Q12849 480 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 IMPG1Q17R60 797 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 GTDC1Q4AE62 458 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 SGO1Q5FBB7 561 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 RFLNAQ6ZTI6 216 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 KCTD8Q6ZWB6 473 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 LRRC70Q7Z2Q7 622 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 SPRED2Q7Z698 418 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 C10orf111Q8N326 155 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 L3MBTL4Q8NA19 623 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 CSGALNACT1Q8TDX6 532 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ASB11Q8WXH4 323 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ULK4Q96C45 1275 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 COPS8Q99627 209 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 CPEB1Q9BZB8 566 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 OSBPL6Q9BZF3 934 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 KCNH6Q9H252 994 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 MAGIXQ9H6Y5 334 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 PARVBQ9HBI1 364 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 MRPS18AQ9NVS2 196 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 USE1Q9NZ43 259 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ZNHIT2Q9UHR6 403 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 GPR160Q9UJ42 338 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 UTS2RQ9UKP6 389 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 DLGAP4Q9Y2H0 992 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 A0A096LPI6 279 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 GFYI3L273 518 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 J3KRW8 73 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 C1SP09871 688 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 JUNBP17275 347 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ELK4P28324 431 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 HLA-FP30511 346 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ALDH9A1P49189 494 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 EPHA5P54756 1037 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 NUP107P57740 925 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 RPS14P62263 151 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 BOP1Q14137 746 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 PON2Q15165 354 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 CPSF6Q16630 551 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ZIK1Q3SY52 487 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 SPOUT1Q5T280 376 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 CNKSR3Q6P9H4 555 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ZDHHC13Q8IUH4 622 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 RASGRP3Q8IV61 690 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 MICU2Q8IYU8 434 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 TCAIMQ8N3R3 496 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 FBXO30Q8TB52 745 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ZNF566Q969W8 418 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 TESCQ96BS2 214 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 MTFMTQ96DP5 389 aaKnown RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 SLC47A1Q96FL8 570 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 SAMD11Q96NU1 681 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 CPPED1Q9BRF8 314 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 PAK6Q9NQU5 681 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-202ENST00000360642 ARL15Q9NXU5 204 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 SH3BP1Q9Y3L3 701 aa7.04□□□□□ -1.28
CLCN3-202ENST00000360642 HMX3A6NHT5 357 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 H3BMQ9 156 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CREG1O75629 220 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CST1P01037 141 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 C8GP07360 202 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 MPC1LP0DKB6 136 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 PRPS2P11908 318 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 YAP1P46937 504 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SPINT3P49223 89 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 HNMTP50135 292 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 IST1P53990 364 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 IL13RA1P78552 427 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ROM1Q03395 351 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 DCTN2Q13561 401 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 TDGQ13569 410 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SLC9A5Q14940 896 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ZDHHC20Q5W0Z9 365 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 NEK5Q6P3R8 708 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 C22orf39Q6P5X5 142 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ZNF773Q6PK81 442 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 VRK3Q8IV63 474 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SVOPLQ8N434 492 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 BEND7Q8N7W2 519 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 OR13F1Q8NGS4 319 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CLHC1Q8NHS4 586 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 NETO1Q8TDF5 533 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 MRPS31Q92665 395 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 FCRL1Q96LA6 429 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 COG8Q96MW5 612 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ZNF641Q96N77 438 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 MBOAT4Q96T53 435 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 TOR3AQ9H497 397 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ACTR8Q9H981 624 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 POLR1BQ9H9Y6 1135 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms