RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 SUPT3HO75486 399 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 TM7SF2O76062 418 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 MATN4O95460 622 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ESRRBO95718 433 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CLDN1O95832 211 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CHEK2O96017 543 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 OTCP00480 354 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 HIST1H2AGP0C0S8 130 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-201ENST00000355766 PRSS56P0CW18 603 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 UGT1A6P19224 532 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 HIST1H2ADP20671 130 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CYP2A7P20853 494 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 UGT1A1P22309 533 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 UGT1A4P22310 534 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 SERPINB3P29508 390 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ARRB2P32121 409 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 TRIM23P36406 574 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ATP4BP51164 291 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 BLKP51451 505 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 HK3P52790 923 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ACTN3Q08043 901 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-201ENST00000355766 TUBB3Q13509 450 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 HERC3Q15034 1050 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 TCEA2Q15560 299 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 PFKFB4Q16877 469 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 SMU1Q2TAY7 513 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 KRTAP21-3Q3LHN1 58 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 GGTA1PQ4G0N0 100 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ZNF658BQ4V348 819 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-201ENST00000355766 KANK2Q63ZY3 851 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 GKN2Q86XP6 184 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 SLC22A15Q8IZD6 547 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CLYBLQ8N0X4 340 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CPSF7Q8N684 471 aaKnown RBP6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CLDN19Q8N6F1 224 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CCNYL1Q8N7R7 359 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ZNF781Q8N8C0 355 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 Q8N9G6 341 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-201ENST00000355766 TEX19Q8NA77 164 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 OR56A4Q8NGH8 313 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 RFWD2Q8NHY2 731 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 HM13Q8TCT9 377 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ADAMTS17Q8TE56 1095 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 EEF1AKMT1Q8WVE0 214 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 SCAMP4Q969E2 229 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CMTM5Q96DZ9 223 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 HIST1H2AHQ96KK5 128 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 TAAR9Q96RI9 348 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 HIST1H2AJQ99878 128 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CCM2Q9BSQ5 444 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 H2AFJQ9BTM1 129 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 DDA1Q9BW61 102 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 TEX101Q9BY14 249 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 SLC29A3Q9BZD2 475 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 C20orf27Q9GZN8 174 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 C1orf21Q9H246 121 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 MMADHCQ9H3L0 296 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-201ENST00000355766 RABEP2Q9H5N1 569 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 PARVBQ9HBI1 364 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 PRDM8Q9NQV8 689 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ABCF3Q9NUQ8 709 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 HEY2Q9UBP5 337 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 PTBP2Q9UKA9 531 aaKnown RBP6.68□□□□□ -1.34
VPS13A-201ENST00000355766 PCTPQ9UKL6 214 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 TMPRSS11EQ9UL52 423 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ITM2BQ9Y287 266 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 RRP15Q9Y3B9 282 aaKnown RBP6.68□□□□□ -1.34
VPS13A-201ENST00000355766 NF1P21359 2839 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 SLC5A10A0PJK1 596 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 WIPF3A6NGB9 483 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 NPIPB8E9PQR5 432 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 K7EM74 188 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 UBXN8O00124 270 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 CDC7O00311 574 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 E2F3O00716 465 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 FCHO1O14526 889 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 AZIN1O14977 448 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 GPR39O43194 453 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 SGTAO43765 313 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 PSIP1O75475 530 aaKnown RBP6.67□□□□□ -1.34
VPS13A-201ENST00000355766 LYPLA1O75608 230 aaPredicted RBP6.67□□□□□ -1.34
VPS13A-201ENST00000355766 SUPT7LO94864 414 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 WDR47O94967 919 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 RASGRP1O95267 797 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 CATP04040 527 aaKnown RBP6.67□□□□□ -1.34
VPS13A-201ENST00000355766 RPN2P04844 631 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 THBDP07204 575 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 CHRNGP07510 517 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 F7P08709 466 aaPredicted RBP6.67□□□□□ -1.34
VPS13A-201ENST00000355766 ANXA5P08758 320 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 UROSP10746 265 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 MYCLP1P12525 358 aaPredicted RBP6.67□□□□□ -1.34
VPS13A-201ENST00000355766 CTSEP14091 401 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 KELP23276 732 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 CCR7P32248 378 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 HSD17B2P37059 387 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 GPR1P46091 355 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 PNLIPRP1P54315 467 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 KIAA1024LP59773 190 aa6.67□□□□□ -1.34
VPS13A-201ENST00000355766 DMPKQ09013 629 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms