RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CENPSQ8N2Z9 138 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 RHCGQ9UBD6 479 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 EXTL2Q9UBQ6 330 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 B4GALT2O60909 372 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 RAD51DO75771 328 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF30P17039 623 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 AOC1P19801 751 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 PRKACGP22612 351 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 ADGRF1Q5T601 910 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 PHTF2Q8N3S3 785 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF283Q8N7M2 679 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 ARNTL2Q8WYA1 636 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 MOAP1Q96BY2 351 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 TMEM74Q96NL1 305 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 NEDD4LQ96PU5 975 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 ASB6Q9NWX5 421 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 TVP23AA6NH52 213 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 F7P08709 466 aaPredicted RBP14.39□□□□□ -0.11
LMX1B-201ENST00000355497 SLC9A3P48764 834 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 SOWAHAQ2M3V2 549 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 TBRG1Q3YBR2 411 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF584Q8IVC4 421 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 CCDC28AQ8IWP9 274 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 TCEANCQ8N8B7 351 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 SLC35B2Q8TB61 432 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 CYB5D2Q8WUJ1 264 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 PHOX2BQ99453 314 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 POLDIP3Q9BY77 421 aaKnown RBP14.39□□□□□ -0.11
LMX1B-201ENST00000355497 BCAS2O75934 225 aaPredicted RBP14.39□□□□□ -0.11
LMX1B-201ENST00000355497 NRIP1P48552 1158 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 OR6N2Q8NGY6 317 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 C11orf84Q9BUA3 381 aaPredicted RBP14.39□□□□□ -0.11
LMX1B-201ENST00000355497 RANBP3Q9H6Z4 567 aaPredicted RBP14.39□□□□□ -0.11
LMX1B-201ENST00000355497 SIX2Q9NPC8 291 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 IFNA1P01562 189 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 SLC18A1P54219 525 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 CTBP2P56545 445 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 EMX2Q04743 252 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 TGFBIQ15582 683 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 TIGD5Q53EQ6 642 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 TMEM236Q5W0B7 351 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 SLC16A9Q7RTY1 509 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 SLC9B2Q86UD5 537 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 KCTD13Q8WZ19 329 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 PTGES2Q9H7Z7 377 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 TIGARQ9NQ88 270 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 SLC2A6Q9UGQ3 507 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 RNF11Q9Y3C5 154 aa14.39□□□□□ -0.11
LMX1B-201ENST00000355497 A8MV72 311 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-201ENST00000355497 M0R2N6 131 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 PEX12O00623 359 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 KLF11O14901 512 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 KCNJ13O60928 360 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 CCND3P30281 292 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-201ENST00000355497 MLLT10P55197 1068 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 CRHR2Q13324 411 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 MYLK3Q32MK0 819 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 LRRC37A5PQ49AS3 106 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 C2orf27AQ580R0 203 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 GTF2IRD2BQ6EKJ0 949 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 GTF2IRD2Q86UP8 949 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 ZC3HC1Q86WB0 502 aaKnown RBP14.38□□□□□ -0.11
LMX1B-201ENST00000355497 OR10Q1Q8NGQ4 319 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 OTUB2Q96DC9 234 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 TTTY10Q9BZA0 68 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 CD93Q9NPY3 652 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF451Q9Y4E5 1061 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 SOX1O00570 391 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-201ENST00000355497 POP7O75817 140 aaKnown RBP14.38□□□□□ -0.11
LMX1B-201ENST00000355497 THEGLP0DJG4 465 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 S1PR1P21453 382 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 EDNRBP24530 442 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 ADH7P40394 386 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 DHPSP49366 369 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-201ENST00000355497 ATP4BP51164 291 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 LBX2Q6XYB7 198 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 SAMD12Q8N8I0 201 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 OR4E2Q8NGC2 313 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 OR8K3Q8NH51 312 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF675Q8TD23 568 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 MMP27Q9H306 513 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 A8MU76 341 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 MRPL3P09001 348 aaKnown RBP14.38□□□□□ -0.11
LMX1B-201ENST00000355497 SPARCP09486 303 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 HTR2AP28223 471 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 UAP1L1Q3KQV9 507 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 MLIPQ5VWP3 458 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 FBXL22Q6P050 247 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 BAIAP2L2Q6UXY1 529 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF572Q7Z3I7 529 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-201ENST00000355497 GKN2Q86XP6 184 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 CD99L2Q8TCZ2 262 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 TDP1Q9NUW8 608 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 CLDN7O95471 211 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 TBX18O95935 607 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 SCNN1AP37088 669 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 REEP3Q6NUK4 255 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 ZSWIM9Q86XI8 627 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 OR2AP1Q8NGE2 309 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 BBS10Q8TAM1 723 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms