RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 ASNA1O43681 348 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 SGSHP51688 502 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 ST3GAL3Q11203 375 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 MERTKQ12866 999 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.33□□□□□ -0.12
COL17A1-201ENST00000353479 MANEALQ5VSG8 457 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 FIGLAQ6QHK4 219 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 OR8K5Q8NH50 307 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 DOK4Q8TEW6 326 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 DTD2Q96FN9 168 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 IL4I1Q96RQ9 567 aa14.33□□□□□ -0.12
COL17A1-201ENST00000353479 MYO5AQ9Y4I1 1855 aaKnown RBP14.32□□□□□ -0.12
COL17A1-201ENST00000353479 GPR39O43194 453 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 CPNE3O75131 537 aaKnown RBP14.32□□□□□ -0.12
COL17A1-201ENST00000353479 TBX10O75333 385 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 ECDO95905 644 aaPredicted RBP14.32□□□□□ -0.12
COL17A1-201ENST00000353479 OR12D1P0DN82 309 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 GNALP38405 381 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 POU6F2P78424 691 aaPredicted RBP14.32□□□□□ -0.12
COL17A1-201ENST00000353479 IQCCQ4KMZ1 466 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 MARCH7Q9H992 704 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 TBC1D17Q9HA65 648 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 RHCGQ9UBD6 479 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 LHX3Q9UBR4 397 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 HCN2Q9UL51 889 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 PCDHB3Q9Y5E6 796 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 IRAK3Q9Y616 596 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 LOC285095A0A1B0GVY8 99 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 HHLA1C9JL84 531 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 HAT1O14929 419 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 SYPP08247 313 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 PTNP21246 168 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 RPA4Q13156 261 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 KCTD21Q4G0X4 260 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 TMEM240Q5SV17 173 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 TTLL10Q6ZVT0 673 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 BTN2A1Q7KYR7 527 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 TREML1Q86YW5 311 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 PTERQ96BW5 349 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 KIAA0355O15063 1070 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 ABLIM3O94929 683 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 C1orf189Q5VU69 101 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 OR4C11Q6IEV9 310 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 PLXDC1Q8IUK5 500 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 MFSD6LQ8IWD5 586 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 POC5Q8NA72 575 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 AIG1Q9NVV5 245 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 GALNT8Q9NY28 637 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 NENFQ9UMX5 172 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 DNAJC15Q9Y5T4 150 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 DAPL1A0PJW8 107 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 C1orf226A1L170 272 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 DFNA5O60443 496 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 CXCL12P48061 93 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 IER5LQ5T953 404 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 DUS1LQ6P1R4 473 aaKnown RBP14.32□□□□□ -0.12
COL17A1-201ENST00000353479 SLC36A4Q6YBV0 504 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 TRIM73Q86UV7 250 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 MOAP1Q96BY2 351 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 EPYCQ99645 322 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 CCDC106Q9BWC9 280 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 COMMD3-BMI1R4GMX3 469 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 GABRA3P34903 492 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 IRF4Q15306 451 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 NNATQ16517 81 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 DEFB110Q30KQ9 67 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 KANK2Q63ZY3 851 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 THAP3Q8WTV1 239 aaPredicted RBP14.32□□□□□ -0.12
COL17A1-201ENST00000353479 DGCR14Q96DF8 476 aaKnown RBP14.32□□□□□ -0.12
COL17A1-201ENST00000353479 PKP2Q99959 881 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 GPRC5BQ9NZH0 403 aa14.32□□□□□ -0.12
COL17A1-201ENST00000353479 APBB3O95704 486 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 RNH1P13489 461 aaKnown RBP14.31□□□□□ -0.12
COL17A1-201ENST00000353479 CSNK1DP48730 415 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 ADARP55265 1226 aaKnown RBP14.31□□□□□ -0.12
COL17A1-201ENST00000353479 ERVPABLB-1P60509 514 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 CDK3Q00526 305 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 FLYWCH1Q4VC44 716 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 KLHL22Q53GT1 634 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 CLIP4Q8N3C7 705 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 NUP43Q8NFH3 380 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 MCCC2Q9HCC0 563 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 A0A096LPI6 279 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 EIF3FO00303 357 aaPredicted RBP14.31□□□□□ -0.12
COL17A1-201ENST00000353479 HMGN1P05114 100 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 GP1BBP13224 206 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 GSTM3P21266 225 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 OR1E2P47887 323 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 RNF144AP50876 292 aaPredicted RBP14.31□□□□□ -0.12
COL17A1-201ENST00000353479 SCN9AQ15858 1988 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 RNASE12Q5GAN4 147 aaKnown RBP14.31□□□□□ -0.12
COL17A1-201ENST00000353479 TMEM107Q6UX40 140 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 AQP11Q8NBQ7 271 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 FBXL8Q96CD0 374 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 L3HYPDHQ96EM0 354 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 MCUBQ9NWR8 336 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 PAIP2BQ9ULR5 123 aaKnown RBP14.31□□□□□ -0.12
COL17A1-201ENST00000353479 MAN2B2Q9Y2E5 1009 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 POFUT2Q9Y2G5 429 aa14.31□□□□□ -0.12
COL17A1-201ENST00000353479 RBM7Q9Y580 266 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms