RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 OR10A4Q9H209 315 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 WASF2Q9Y6W5 498 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 VILLO15195 856 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 TLX2O43763 284 aaPredicted RBP22.31■■□□□ 1.16
NPAS3-201ENST00000346562 OXTRP30559 389 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 ENTPD1P49961 510 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 ODF4Q2M2E3 257 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 ZDHHC14Q8IZN3 488 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 AMBNQ9NP70 447 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 ERVK-18Q9QC07 812 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 NOP16Q9Y3C1 178 aaKnown RBP22.31■■□□□ 1.16
NPAS3-201ENST00000346562 M0R129 80 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 MAN2B1O00754 1011 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 G6PDP11413 515 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 GRIA1P42261 906 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 REEP3Q6NUK4 255 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 TRAM1L1Q8N609 369 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 METTL27Q8N6F8 245 aaPredicted RBP22.31■■□□□ 1.16
NPAS3-201ENST00000346562 ZNF709Q8N972 641 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 SLCO2A1Q92959 643 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 RAD9AQ99638 391 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 PARPBPQ9NWS1 579 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 WRAP73Q9P2S5 460 aaPredicted RBP22.31■■□□□ 1.16
NPAS3-201ENST00000346562 SLC7A11Q9UPY5 501 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 PRSS51A0A1B0GVH4 220 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 GRXCR2A6NFK2 248 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 TSPAN6O43657 245 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 DFNA5O60443 496 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 HSD3B2P26439 372 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 SLC15A1P46059 708 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 TMPPEQ6ZT21 453 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 SH3YL1Q96HL8 342 aaPredicted RBP22.3■■□□□ 1.16
NPAS3-201ENST00000346562 C17orf62Q9BQA9 187 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 PELOQ9BRX2 385 aaKnown RBP22.3■■□□□ 1.16
NPAS3-201ENST00000346562 PPP4R1LQ9P1A2 415 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 FARSAQ9Y285 508 aaKnown RBP22.3■■□□□ 1.16
NPAS3-201ENST00000346562 BLMHQ13867 455 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 LASP1Q14847 261 aaKnown RBP22.3■■□□□ 1.16
NPAS3-201ENST00000346562 SWT1Q5T5J6 900 aaKnown RBP22.3■■□□□ 1.16
NPAS3-201ENST00000346562 ZNF350Q9GZX5 532 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 REEP4Q9H6H4 257 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 CMAHPQ9Y471 501 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 CDH10Q9Y6N8 788 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 LDB2O43679 373 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 CD72P21854 359 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 SUSD1Q6UWL2 747 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 OAZ2O95190 189 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 HNRNPA1P09651 372 aaKnown RBP eCLIP22.3■■□□□ 1.16
NPAS3-201ENST00000346562 LIPJQ5W064 366 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 PIGWQ7Z7B1 504 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 C13orf42A0A1B0GVH6 325 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 SMCO3A2RU48 225 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 FUT4P22083 530 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 GDF5P43026 501 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 TUBA1BP68363 451 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 TUBA4AP68366 448 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 CYBRD1Q53TN4 286 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 TUBA3EQ6PEY2 450 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 TUBA1AQ71U36 451 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 LRIG1Q96JA1 1093 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 DCSTAMPQ9H295 470 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 NELFAQ9H3P2 528 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 RETREG1Q9H6L5 497 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 TMEM184CQ9NVA4 438 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 SCP2D1Q9UJQ7 156 aa22.3■■□□□ 1.16
NPAS3-201ENST00000346562 C2orf92A0A1B0GVN3 265 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 MPC1LP0DKB6 136 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 RPS3AP61247 264 aaKnown RBP22.29■■□□□ 1.16
NPAS3-201ENST00000346562 GLT8D1Q68CQ7 371 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 KBTBD6Q86V97 674 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 ELP5Q8TE02 316 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 IGSF21Q96ID5 467 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 FXYD6-FXYD2A0A087WZ82 144 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 DPPA5A6NC42 116 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 SNAPC5O75971 98 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 CTBP2P56545 445 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 SLC25A11Q02978 314 aaKnown RBP22.29■■□□□ 1.16
NPAS3-201ENST00000346562 SNX29P2Q8IUI4 249 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 C2CD4AQ8NCU7 369 aaPredicted RBP22.29■■□□□ 1.16
NPAS3-201ENST00000346562 NSMAFQ92636 917 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 NAA11Q9BSU3 229 aaPredicted RBP22.29■■□□□ 1.16
NPAS3-201ENST00000346562 DEFB126Q9BYW3 111 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 FXYD6Q9H0Q3 95 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 DLGAP4Q9Y2H0 992 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 ZNF35P13682 527 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 S1PR1P21453 382 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 UNQ6126/PRO20091Q6UXV3 157 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 ZC3H10Q96K80 434 aaKnown RBP22.29■■□□□ 1.16
NPAS3-201ENST00000346562 C1orf74Q96LT6 269 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 SMOQ99835 787 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 FUZQ9BT04 418 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 RAD51DO75771 328 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 ALG10BQ5I7T1 473 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 RAB12Q6IQ22 244 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.29■■□□□ 1.16
NPAS3-201ENST00000346562 MCHR1Q99705 422 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 CAMTA1Q9Y6Y1 1673 aa22.29■■□□□ 1.16
NPAS3-201ENST00000346562 CXorf49A8MYA2 514 aaPredicted RBP22.28■■□□□ 1.16
NPAS3-201ENST00000346562 ID2Q02363 134 aa22.28■■□□□ 1.16
NPAS3-201ENST00000346562 OR6N2Q8NGY6 317 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms