RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 HIST1H2AGP0C0S8 130 aaPredicted RBP15.21■□□□□ 0.03
RAB5C-201ENST00000346213 ALOX15P16050 662 aaPredicted RBP15.21■□□□□ 0.03
RAB5C-201ENST00000346213 HIST1H2ADP20671 130 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 ATP5F1P24539 256 aaPredicted RBP15.21■□□□□ 0.03
RAB5C-201ENST00000346213 RPS15AP62244 130 aaKnown RBP15.21■□□□□ 0.03
RAB5C-201ENST00000346213 CDKL1Q00532 357 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 VN1R5Q7Z5H4 357 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 SLC5A11Q8WWX8 675 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 CCDC126Q96EE4 140 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 HIST1H2AHQ96KK5 128 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 HIST1H2AJQ99878 128 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 H2AFJQ9BTM1 129 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 RBCK1Q9BYM8 510 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 KLHL31Q9H511 634 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 TRPC4Q9UBN4 977 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 ZFP69BQ9UJL9 534 aa15.21■□□□□ 0.03
RAB5C-201ENST00000346213 RDH16O75452 317 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 HSPA4LO95757 839 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 KITP10721 976 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 CASRP41180 1078 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 AGTR2P50052 363 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 AQP5P55064 265 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 MLLT10P55197 1068 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 NCALDP61601 193 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 NAA25Q14CX7 972 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 ATG9BQ674R7 924 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 FAAH2Q6GMR7 532 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 PRMT9Q6P2P2 845 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 MED25Q71SY5 747 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 TMPRSS11BQ86T26 416 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 ASPGQ86U10 573 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 MTDHQ86UE4 582 aaKnown RBP15.2■□□□□ 0.02
RAB5C-201ENST00000346213 TMEM102Q8N9M5 508 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-201ENST00000346213 RERGQ96A58 199 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-201ENST00000346213 ATOH8Q96SQ7 321 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 C17orf62Q9BQA9 187 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 CRB3Q9BUF7 120 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 MFRPQ9BY79 579 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 PCBD2Q9H0N5 130 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 SAR1AQ9NR31 198 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 ZNF282Q9UDV7 671 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-201ENST00000346213 MARCOQ9UEW3 520 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-201ENST00000346213 HAO1Q9UJM8 370 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 C3orf18Q9UK00 162 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 CAPN7Q9Y6W3 813 aa15.2■□□□□ 0.02
RAB5C-201ENST00000346213 LRRC14BA6NHZ5 514 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 VGLL3A8MV65 326 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 IDSB3KWA1 339 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 OR1F1O43749 312 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 NPHS1O60500 1241 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 SNUPNO95149 360 aaKnown RBP15.19■□□□□ 0.02
RAB5C-201ENST00000346213 COX6A1P12074 109 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 MTHFD2P13995 350 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 SERPINB3P29508 390 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 SERPINB5P36952 375 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 HSPA7P48741 367 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 CCR8P51685 355 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 OLR1P78380 273 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 RCN2Q14257 317 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 GARNL3Q5VVW2 1013 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 FAM91A1Q658Y4 838 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 NXPE4Q6UWF7 544 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 SLCO4C1Q6ZQN7 724 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 LANCL3Q6ZV70 420 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 CLNKQ7Z7G1 428 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 ADAMTSL2Q86TH1 951 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 ISCA2Q86U28 154 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 GALNT16Q8N428 558 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 AFAP1L2Q8N4X5 818 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 SLC13A3Q8WWT9 602 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 EXT2Q93063 718 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 MIEF2Q96C03 454 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 SMAD5Q99717 465 aaKnown RBP15.19■□□□□ 0.02
RAB5C-201ENST00000346213 EGFL8Q99944 293 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 HAUS8Q9BT25 410 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 ALG9Q9H6U8 611 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 PNPOQ9NVS9 261 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 HEMK1Q9Y5R4 338 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-201ENST00000346213 TRBC2A0A5B9 178 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 SORBS2O94875 1100 aaKnown RBP15.19■□□□□ 0.02
RAB5C-201ENST00000346213 WDR47O94967 919 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 BMP10O95393 424 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 TFEBP19484 476 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 CCND1P24385 295 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 HK2P52789 917 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 NAGLUP54802 743 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 EEF1A2Q05639 463 aaKnown RBP15.19■□□□□ 0.02
RAB5C-201ENST00000346213 FAM53BQ14153 422 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 SLC22A9Q8IVM8 553 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.19■□□□□ 0.02
RAB5C-201ENST00000346213 CREB3L4Q8TEY5 395 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 KIAA1191Q96A73 305 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 TUBB6Q9BUF5 446 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 VN1R1Q9GZP7 353 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 PTBP2Q9UKA9 531 aaKnown RBP15.19■□□□□ 0.02
RAB5C-201ENST00000346213 RAP2CQ9Y3L5 183 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 NAALAD2Q9Y3Q0 740 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 MAP4K5Q9Y4K4 846 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 MYO18BQ8IUG5 2567 aa15.19■□□□□ 0.02
RAB5C-201ENST00000346213 IGHV3-20A0A0C4DH32 117 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms