RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 MTMR10Q9NXD2 777 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 KLHL42Q9P2K6 505 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 WNT16Q9UBV4 365 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 PLCL2Q9UPR0 1127 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 C15orf41Q9Y2V0 281 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 LOC285095A0A1B0GVY8 99 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 PGM3O95394 542 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 C6orf47O95873 294 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 NCK1P16333 377 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 GSTM2P28161 218 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 GGT5P36269 586 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 SIX1Q15475 284 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 RNF111Q6ZNA4 994 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 C10orf82Q8WW14 230 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 TMEM74Q96NL1 305 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 HDAC8Q9BY41 377 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 TMEM168Q9H0V1 697 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 TPT1P8Q9HAU6 139 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 MKS1Q9NXB0 559 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 TAAR2Q9P1P5 351 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 CPNE7Q9UBL6 633 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 PRRT4C9JH25 899 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 UFM1P61960 85 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 EFHD2Q96C19 240 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 PKP4Q99569 1192 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 A0A1W2PP18 115 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 PDYNP01213 254 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 DGKQP52824 942 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 OLR1P78380 273 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 KLHL26Q53HC5 615 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 C3orf38Q5JPI3 329 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 OR4C11Q6IEV9 310 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 GALNT5Q7Z7M9 940 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 ATCAYQ86WG3 371 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 ZFAND4Q86XD8 727 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 DENND6BQ8NEG7 585 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 MDGA1Q8NFP4 955 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 OR2L2Q8NH16 312 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 SLC22A8Q8TCC7 542 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 LRRC46Q96FV0 321 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 KCNA7Q96RP8 456 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 TMEM9BQ9NQ34 198 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 BCKDKO14874 412 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 CDC40O60508 579 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 MAZP56270 477 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 ABHD17BQ5VST6 288 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 USP30Q70CQ3 517 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 OR52E4Q8NGH9 312 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 OR5AR1Q8NGP9 310 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 FAM81AQ8TBF8 368 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 SNX33Q8WV41 574 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 FCRL4Q96PJ5 515 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 OR52B2Q96RD2 323 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 OLFM1Q99784 485 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 TM7SF3Q9NS93 570 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 DNAJB9Q9UBS3 223 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 LY75O60449 1722 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 A0A0J9YY10 115 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 PRKAR1AP10644 381 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 THRBP10828 461 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 NDUFV2P19404 249 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 ZNF33BQ06732 778 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 CEP97Q8IW35 865 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 PNPLA1Q8N8W4 532 aa15.75■□□□□ 0.11
SMARCA4-201ENST00000344626 ALDOAP04075 364 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 LINGO3P0C6S8 592 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 ANXA8P13928 327 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 GLULP15104 373 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 MAGP20916 626 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 FCHO2Q0JRZ9 810 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 ABHD18Q0P651 414 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 NDUFAF6Q330K2 333 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 SPATS1Q496A3 300 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 SHISA6Q6ZSJ9 500 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 WFDC5Q8TCV5 224 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 WDR45Q9Y484 360 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 LOC100506127A0A0U1RQW1 187 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 TPST2O60704 377 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 SHOX2O60902 331 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 NUP62P37198 522 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 PIGWQ7Z7B1 504 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 RAB43Q86YS6 212 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 KBTBD8Q8NFY9 601 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 TSPAN14Q8NG11 270 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 OR13H1Q8NG92 308 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 OR10Q1Q8NGQ4 319 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 TMEM234Q8WY98 164 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 NUAK2Q9H093 628 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 SSR3Q9UNL2 185 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 ZFR2Q9UPR6 939 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 AQP12BA6NM10 295 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 DLGAP3O95886 979 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 ECDO95905 644 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 ALOX12P18054 663 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 SPEM2Q0P670 501 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 TARDBPQ13148 414 aaKnown RBP eCLIP15.74■□□□□ 0.111e-8■■■■■ 27.7
SMARCA4-201ENST00000344626 ARHGAP19Q14CB8 494 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 PDK3Q15120 406 aa15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 LACTB2Q53H82 288 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-201ENST00000344626 SPANXN2Q5MJ10 180 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms