RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 POLR2IP36954 125 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CRATP43155 626 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 MAPK12P53778 367 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 C21orf58P58505 322 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 RAB8AP61006 207 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 REEP5Q00765 189 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 TAGLNQ01995 201 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 LRRC32Q14392 662 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 VMACQ2NL98 169 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 DPY19L1Q2PZI1 675 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 FAM98BQ52LJ0 330 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 EOGTQ5NDL2 527 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF438Q7Z4V0 828 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 STK32CQ86UX6 486 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CHERPQ8IWX8 916 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 KCT2Q8NC54 265 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CATSPER1Q8NEC5 780 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 LCN9Q8WX39 176 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 TFAP2CQ92754 450 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 PPCDCQ96CD2 204 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 WDR92Q96MX6 357 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 PRPF18Q99633 342 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 PHF7Q9BWX1 381 aaPredicted RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 RSPO3Q9BXY4 272 aaPredicted RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CHST8Q9H2A9 424 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 LMAN1LQ9HAT1 526 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 OLAHQ9NV23 265 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ATP6V1HQ9UI12 483 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CNOT11Q9UKZ1 510 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 FAM220BPB1ANY3 271 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PGRMC2O15173 223 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 IL9P15248 144 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 HPCAL1P37235 193 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PPP1CAP62136 330 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 VLDLRP98155 873 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 VAC14Q08AM6 782 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 FZD5Q13467 585 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PDE7AQ13946 482 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PLCL1Q15111 1095 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 CAMKMTQ7Z624 323 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 SPRED1Q7Z699 444 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 TRIM69Q86WT6 500 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 RNF130Q86XS8 419 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 FAM9CQ8IZT9 166 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 FAM47BQ8NA70 645 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 GOLM1Q8NBJ4 401 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 OR2L8Q8NGY9 312 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 OR8K5Q8NH50 307 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 CYGBQ8WWM9 190 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 EXOSC8Q96B26 276 aaKnown RBP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 OTUB1Q96FW1 271 aaPredicted RBP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 TPD52L3Q96J77 140 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 SLC35A5Q9BS91 424 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 CXorf36Q9H7Y0 433 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 RMI1Q9H9A7 625 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 ANKRA2Q9H9E1 313 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 BATF3Q9NR55 127 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 TMEM74BQ9NUR3 256 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 SCML1Q9UN30 329 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 ASXL3Q9C0F0 2248 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 CACNA1IQ9P0X4 2223 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 CELSR3Q9NYQ7 3312 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 FREM2Q5SZK8 3169 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 KRBA1A5PL33 1030 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 A6NCN8 305 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 LRRC72A6NJI9 287 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 RNASET2O00584 256 aaKnown RBP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 NDUFS4O43181 175 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 OR6B1O95007 311 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PRSS23O95084 383 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 RASAL1O95294 804 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 C9P02748 559 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 CHRM5P08912 532 aaPredicted RBP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 SMIM18P0DKX4 95 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PVRP15151 417 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 POLR2CP19387 275 aaPredicted RBP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 POU3F3P20264 500 aaPredicted RBP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 KDELR2P33947 212 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 CDH15P55291 814 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 CYBRD1Q53TN4 286 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 INTS11Q5TA45 600 aaKnown RBP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 IRAK1BP1Q5VVH5 260 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 ABRAXAS1Q6UWZ7 409 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 OLIG3Q7RTU3 272 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 SERPINA11Q86U17 422 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 AMIGO1Q86WK6 493 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 CARM1Q86X55 608 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 TMEFF1Q8IYR6 380 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 OR10G6Q8NH81 332 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 DNASE1L2Q92874 299 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PYURFQ96I23 114 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 METTL2AQ96IZ6 378 aaKnown RBP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PHF12Q96QT6 1004 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 PELI2Q9HAT8 420 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 MYNNQ9NPC7 610 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 MIEF1Q9NQG6 463 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 USP36Q9P275 1121 aaKnown RBP7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 BTNL2Q9UIR0 455 aa7.05□□□□□ -1.28
SRFBP1-201ENST00000339397 A0A1W2PRB8 838 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms