RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SCTRP47872 440 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 NR0B1P51843 470 aaKnown RBP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 RAB8AP61006 207 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 PPIAP62937 165 aaKnown RBP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 TIAL1Q01085 375 aaKnown RBP eCLIP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 PLGLB1Q02325 96 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 HYAL2Q12891 473 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 GPS1Q13098 491 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 PSD4Q8NDX1 1056 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 MYRIPQ8NFW9 859 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 OR56A3Q8NH54 315 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 VMP1Q96GC9 406 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 SNF8Q96H20 258 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 HIST1H2AHQ96KK5 128 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 OR4K3Q96R72 315 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 NDNQ99608 321 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 HIST1H2AJQ99878 128 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 FAM167BQ9BTA0 163 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 H2AFJQ9BTM1 129 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 SLC6A16Q9GZN6 736 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 SPNS1Q9H2V7 528 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 RHBGQ9H310 441 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 XAB2Q9HCS7 855 aaKnown RBP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 DEPPQ9NTK1 212 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 CCM2LQ9NUG4 571 aaPredicted RBP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 ARL15Q9NXU5 204 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 DNAJB12Q9NXW2 375 aaKnown RBP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 TAS2R13Q9NYV9 303 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 KCMF1Q9P0J7 381 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 ZNF223Q9UK11 482 aaPredicted RBP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 ERVK-11Q9UQG0 969 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 YARS2Q9Y2Z4 477 aaKnown RBP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 MMACHCQ9Y4U1 282 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 PINLYPA6NC86 204 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 FIGNL2A6NMB9 653 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 A8MVJ9 347 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 KLK2P20151 261 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 ACVR2AP27037 513 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 HNF4AP41235 474 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 PPP2R2AP63151 447 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 REEP5Q00765 189 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 CSHL1Q14406 222 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 GXYLT1Q4G148 440 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 CATSPEREQ5SY80 951 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 RGS9BPQ6ZS82 235 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 GPALPP1Q8IXQ4 340 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 CA13Q8N1Q1 262 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 OR2M7Q8NG81 312 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 OR10Q1Q8NGQ4 319 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 CREB3L4Q8TEY5 395 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 SLC5A11Q8WWX8 675 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 NCLNQ969V3 563 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 LINGO1Q96FE5 620 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 PDLIM2Q96JY6 352 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 SERPINB12Q96P63 405 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 SMC6Q96SB8 1091 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 CCDC77Q9BR77 488 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 ZDHHC11Q9H8X9 412 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 PNO1Q9NRX1 252 aaKnown RBP10.69□□□□□ -0.7
CSMD2-202ENST00000338325 HOMER3Q9NSC5 361 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 PNPLA3Q9NST1 481 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 HPF1Q9NWY4 346 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 PPIEQ9UNP9 301 aaKnown RBP10.69□□□□□ -0.7
CSMD2-202ENST00000338325 L3MBTL1Q9Y468 752 aa10.69□□□□□ -0.7
CSMD2-202ENST00000338325 OR14I1A6ND48 311 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 FAM166BA8MTA8 275 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 GOLGA8MH3BSY2 632 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 BCKDKO14874 412 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 ZFAND5O76080 213 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 SMIM10L1P0DMW3 83 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 ZFP36L2P47974 494 aaKnown RBP10.68□□□□□ -0.7
CSMD2-202ENST00000338325 AP1S2P56377 157 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 HSP90AA5PQ58FG0 334 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 ZNF585AQ6P3V2 769 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 PAQR3Q6TCH7 311 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 B3GNT6Q6ZMB0 384 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 SLC22A16Q86VW1 577 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 SCUBE1Q8IWY4 988 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 MMP21Q8N119 569 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 ANKRD53Q8N9V6 530 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 C2CD4AQ8NCU7 369 aaPredicted RBP10.68□□□□□ -0.7
CSMD2-202ENST00000338325 MCUQ8NE86 351 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 TRPV3Q8NET8 790 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 OR5M9Q8NGP3 310 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 ASB15Q8WXK1 588 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 NEIL2Q969S2 332 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 FBXL8Q96CD0 374 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 SMIM10Q96HG1 83 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 TTYH2Q9BSA4 534 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 POLDIP3Q9BY77 421 aaKnown RBP10.68□□□□□ -0.7
CSMD2-202ENST00000338325 TTTY12Q9BZ98 90 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 PELI2Q9HAT8 420 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 IARS2Q9NSE4 1012 aaKnown RBP10.68□□□□□ -0.7
CSMD2-202ENST00000338325 ST6GALNAC2Q9UJ37 374 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 MAD1L1Q9Y6D9 718 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 ANKHD1Q8IWZ3 2542 aaKnown RBP10.68□□□□□ -0.7
CSMD2-202ENST00000338325 A0A0G2JMM0 328 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 A0A1W2PPB8 328 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 A0A1W2PRS3 328 aa10.68□□□□□ -0.7
CSMD2-202ENST00000338325 CTAGE15A4D2H0 777 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms