RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CFAP20Q9Y6A4 193 aaKnown RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 LILRB3O75022 631 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 IGFBP1P08833 259 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 GSTM1P09488 218 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 GABRB1P18505 474 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 SP140Q13342 867 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 SCARB2Q14108 478 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 MED22Q15528 200 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 LEXMQ3ZCV2 418 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 SYTL3Q4VX76 610 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 GRHL2Q6ISB3 625 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 TTC23LQ6PF05 361 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 HTR3DQ70Z44 454 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 ARMCX6Q7L4S7 300 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 C2orf73Q8N5S3 287 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 RASGEF1AQ8N9B8 481 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 CYB5D2Q8WUJ1 264 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 CHTF18Q8WVB6 975 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 POP5Q969H6 163 aaKnown RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 MYDGFQ969H8 173 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 NRTNQ99748 197 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 KCNS3Q9BQ31 491 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 ASAH2Q9NR71 780 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 C14orf119Q9NWQ9 140 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 BTNL2Q9UIR0 455 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 NEDD8-MDP1E9PL57 170 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 H0YIV9 168 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 LEFTY2O00292 366 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 EIF3FO00303 357 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 CCL16O15467 120 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 SLCO2B1O94956 709 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 RPLP0P05388 317 aaKnown RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 TIA1P31483 386 aaKnown RBP eCLIP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 FEN1P39748 380 aaKnown RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 RGS6P49758 472 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 RPS26P62854 115 aaKnown RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 SLC7A9P82251 487 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 SLC5A12Q1EHB4 618 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 C10orf62Q5T681 223 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 KLHL17Q6TDP4 642 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 USP43Q70EL4 1123 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 TMC8Q8IU68 726 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 RAVER1Q8IY67 606 aaKnown RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 METTL4Q8N3J2 472 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 CELF2-AS1Q8N7Q2 184 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 KREMEN2Q8NCW0 462 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF740Q8NDX6 193 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 VPS37AQ8NEZ2 397 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 LMLNQ96KR4 655 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 FAM129BQ96TA1 746 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 IMPAD1Q9NX62 359 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 HS3ST2Q9Y278 367 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 ITM2BQ9Y287 266 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 IFT52Q9Y366 437 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 PPIL1Q9Y3C6 166 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 PLXNA2O75051 1894 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 SERTM1A2A2V5 107 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 CTDSP2O14595 271 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 SNPHO15079 494 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 NPC1O15118 1278 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 ADAMDEC1O15204 470 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 SLC16A5O15375 505 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 PSIP1O75475 530 aaKnown RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 TNFRSF21O75509 655 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 PRIM2P49643 509 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 HNRNPFP52597 415 aaKnown RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 PTPN5P54829 565 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 DMC1Q14565 340 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 PTGES3Q15185 160 aaKnown RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 SF3B4Q15427 424 aaKnown RBP eCLIP11.8□□□□□ -0.521e-6■■■■□ 21.3
VPS33B-201ENST00000333371 TSTQ16762 297 aaKnown RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 MICAQ29983 383 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 IFI44LQ53G44 452 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 WDR53Q7Z5U6 358 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-201ENST00000333371 GPR65Q8IYL9 337 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 CPXM2Q8N436 756 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 OR2A12Q8NGT7 310 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 TMEM159Q96B96 161 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 COQ8BQ96D53 544 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 C19orf43Q9BQ61 176 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 MARCH7Q9H992 704 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 FKBP14Q9NWM8 211 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 RAB23Q9ULC3 237 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 LRRK1Q38SD2 2015 aa11.8□□□□□ -0.52
VPS33B-201ENST00000333371 POP4O95707 220 aaKnown RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 WEE1P30291 646 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 SOAT1P35610 550 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 UGT2B10P36537 528 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 TUBA1BP68363 451 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 UAP1L1Q3KQV9 507 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 RPS26P11Q5JNZ5 115 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 GDPD4Q6W3E5 623 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 TUBA1AQ71U36 451 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 COMMD6Q7Z4G1 85 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 LSRQ86X29 649 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 SLC44A2Q8IWA5 706 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-201ENST00000333371 IL4I1Q96RQ9 567 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 SLC46A2Q9BY10 475 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 ACER3Q9NUN7 267 aa11.79□□□□□ -0.52
VPS33B-201ENST00000333371 ERVK13-1Q9NX77 482 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms