RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 NDUFAF4Q9P032 175 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 SLC6A14Q9UN76 642 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 SMIM35A0A1B0GVV1 85 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 MAGEB17A8MXT2 336 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 PCDH17O14917 1159 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 GUCA1CO95843 209 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 GLUD1P00367 558 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 POMCP01189 267 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 CKMT1AP12532 417 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 RIPPLY1Q0D2K3 151 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 SF3A2Q15428 464 aaKnown RBP23.37■■□□□ 1.33
SOX1-201ENST00000330949 GPR139Q6DWJ6 353 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 GLT6D1Q7Z4J2 308 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 PHF21AQ96BD5 680 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 C1QCP02747 245 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 HMBSP08397 361 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 C1DQ13901 141 aaKnown RBP23.37■■□□□ 1.33
SOX1-201ENST00000330949 FLYWCH1Q4VC44 716 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 MEDAGQ5VYS4 303 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 PSAPL1Q6NUJ1 521 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 ZNF621Q6ZSS3 439 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 PIANPQ8IYJ0 282 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 SYNPOQ8N3V7 929 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 OR4C15Q8NGM1 316 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 OR52J3Q8NH60 311 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 KLHL6Q8WZ60 621 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 NTMT1Q9BV86 223 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 PTTG3PQ9NZH4 202 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 LHCGRP22888 699 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 INPP1P49441 399 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 PPP3R1P63098 170 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 SPIBQ01892 262 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 ALDH6A1Q02252 535 aaKnown RBP23.36■■□□□ 1.33
SOX1-201ENST00000330949 IL10RBQ08334 325 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 MLLT11Q13015 90 aaPredicted RBP23.36■■□□□ 1.33
SOX1-201ENST00000330949 PCBP1Q15365 356 aaKnown RBP eCLIP23.36■■□□□ 1.33
SOX1-201ENST00000330949 CCL14Q16627 93 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 TTC16Q8NEE8 873 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 MYLPFQ96A32 169 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 ZYG11BQ9C0D3 744 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 TMEM248Q9NWD8 314 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 TSR3Q9UJK0 312 aaKnown RBP23.36■■□□□ 1.33
SOX1-201ENST00000330949 F8W810 466 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 TAPBPO15533 448 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 TLR5O60602 858 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 F2P00734 622 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 RRASP10301 218 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 MAPK1P28482 360 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 CDH12P55289 794 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 DBPQ10586 325 aaPredicted RBP23.36■■□□□ 1.33
SOX1-201ENST00000330949 ZNF235Q14590 738 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.36■■□□□ 1.33
SOX1-201ENST00000330949 C9orf131Q5VYM1 1079 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 PHC2Q8IXK0 858 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 LRRC17Q8N6Y2 441 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 BRI3BPQ8WY22 251 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 ACPTQ9BZG2 426 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 ATP6V1HQ9UI12 483 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 CPA4Q9UI42 421 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 ATPIF1Q9UII2 106 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 DOCK4Q8N1I0 1966 aa23.36■■□□□ 1.33
SOX1-201ENST00000330949 C2orf81A6NN90 581 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 WWP2O00308 870 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 CCT3P49368 545 aaKnown RBP23.35■■□□□ 1.33
SOX1-201ENST00000330949 TAF1AQ15573 450 aaPredicted RBP23.35■■□□□ 1.33
SOX1-201ENST00000330949 METAP1DQ6UB28 335 aaPredicted RBP23.35■■□□□ 1.33
SOX1-201ENST00000330949 KIAA1324Q6UXG2 1013 aaKnown RBP23.35■■□□□ 1.33
SOX1-201ENST00000330949 TMEM145Q8NBT3 493 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 MS4A4AQ96JQ5 239 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 EGFL8Q99944 293 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 SLC29A3Q9BZD2 475 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 PPP1R3EQ9H7J1 279 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 CLEC2DQ9UHP7 191 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 RPS10-NUDT3A0A1W2PQS6 291 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 H3BUI4 141 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 LRATO95237 230 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 PRAMEF1O95521 474 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 CLEC2LP0C7M8 214 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 CLCN7P51798 805 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 MADCAM1Q13477 382 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 NFE2L1Q14494 772 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 EXOC3L2Q2M3D2 409 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 TSEN54Q7Z6J9 526 aaKnown RBP23.35■■□□□ 1.33
SOX1-201ENST00000330949 OR8K5Q8NH50 307 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 CLEC4MQ9H2X3 399 aaPredicted RBP23.35■■□□□ 1.33
SOX1-201ENST00000330949 SYNDIG1Q9H7V2 258 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 ELOVL2Q9NXB9 296 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 WWOXQ9NZC7 414 aa23.35■■□□□ 1.33
SOX1-201ENST00000330949 ZMAT5Q9UDW3 170 aaKnown RBP23.35■■□□□ 1.33
SOX1-201ENST00000330949 NDUFA2O43678 99 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 TACR1P25103 407 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 PSEN2P49810 448 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 CRYBA2P53672 197 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 LIPKQ5VXJ0 399 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 GPR155Q7Z3F1 870 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 BBS7Q8IWZ6 715 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 MTFMTQ96DP5 389 aaKnown RBP23.34■■□□□ 1.33
SOX1-201ENST00000330949 HHIPQ96QV1 700 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 MED18Q9BUE0 208 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 CD244Q9BZW8 370 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms