RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 IRAK3Q9Y616 596 aa15.87■□□□□ 0.13
CLIP4-201ENST00000320081 GPC6Q9Y625 555 aaPredicted RBP15.87■□□□□ 0.13
CLIP4-201ENST00000320081 FAM170BA6NMN3 283 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 A8MU76 341 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 MCIDASD6RGH6 385 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 NUDT7P0C024 238 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 CCR7P32248 378 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 MPIP34949 423 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 RPS26P11Q5JNZ5 115 aaPredicted RBP15.86■□□□□ 0.13
CLIP4-201ENST00000320081 PGM2L1Q6PCE3 622 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 OXR1Q8N573 874 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 IQCF1Q8N6M8 205 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 CIDECQ96AQ7 238 aaPredicted RBP15.86■□□□□ 0.13
CLIP4-201ENST00000320081 RGMAQ96B86 450 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 TRPV5Q9NQA5 729 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF221Q9UK13 617 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 PCDHGA8Q9Y5G5 932 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 COLEC10Q9Y6Z7 277 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 SLC10A3P09131 477 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 PRKAR1AP10644 381 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 TAF13Q15543 124 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 GFOD2Q3B7J2 385 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 OTUD1Q5VV17 481 aaPredicted RBP15.86■□□□□ 0.13
CLIP4-201ENST00000320081 TMEM174Q8WUU8 243 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 SCRN2Q96FV2 425 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 OCEL1Q9H607 264 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 DAPL1A0PJW8 107 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 OR52A4PA6NMU1 304 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 DENRO43583 198 aaKnown RBP15.86■□□□□ 0.13
CLIP4-201ENST00000320081 B3GALT4O96024 378 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 DCTP40126 519 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 TXNL4AP83876 142 aaKnown RBP15.86■□□□□ 0.13
CLIP4-201ENST00000320081 KCNC4Q03721 635 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 FAM220AQ7Z4H9 259 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 MARCH9Q86YJ5 346 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 GPR135Q8IZ08 494 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 LRRC17Q8N6Y2 441 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 OR5M3Q8NGP4 307 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 OR4C6Q8NH72 309 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 C5orf34Q96MH7 638 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 ITPAQ9BY32 194 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 SP140LQ9H930 580 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 CLDND1Q9NY35 253 aa15.86■□□□□ 0.13
CLIP4-201ENST00000320081 STOX2Q9P2F5 926 aaPredicted RBP15.86■□□□□ 0.13
CLIP4-201ENST00000320081 CNOT1A5YKK6 2376 aaKnown RBP15.86■□□□□ 0.13
CLIP4-201ENST00000320081 ALPPP05187 535 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SCN1BQ07699 218 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SLC5A8Q8N695 610 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 OR8K5Q8NH50 307 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 AP3S1Q92572 193 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SLC25A36Q96CQ1 311 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 LGALS12Q96DT0 336 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF354BQ96LW1 612 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 PRICKLE1Q96MT3 831 aaPredicted RBP15.85■□□□□ 0.13
CLIP4-201ENST00000320081 REEP4Q9H6H4 257 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 LTB4R2Q9NPC1 389 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 MRPS33Q9Y291 106 aaKnown RBP15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SLC1A7O00341 560 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SLC22A1O15245 554 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SOCS5O75159 536 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 HSD17B1P14061 328 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SKP1P63208 163 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 HOXC5Q00444 222 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 MYBPC3Q14896 1274 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF829Q3KNS6 432 aaPredicted RBP15.85■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF404Q494X3 552 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 LCN8Q6JVE9 175 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 CARM1Q86X55 608 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF347Q96SE7 839 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 POPDC3Q9HBV1 291 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 TAS2R9Q9NYW1 312 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 TMEM181Q9P2C4 612 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 MKLN1Q9UL63 735 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 GPR45Q9Y5Y3 372 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 TRIOBPQ9H2D6 2365 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 RIIAD1A6NNX1 92 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 EPCAMP16422 314 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 CD9P21926 228 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 TUBA4AP68366 448 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 NPRL3Q12980 569 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 GINS1Q14691 196 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 UGT8Q16880 541 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 RUNDC3AQ59EK9 446 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF805Q5CZA5 627 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 TOR1AIP1Q5JTV8 583 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 WFDC5Q8TCV5 224 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 MYEOVQ96EZ4 313 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 MRPL48Q96GC5 212 aaKnown RBP15.85■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF514Q96K75 400 aaPredicted RBP15.85■□□□□ 0.13
CLIP4-201ENST00000320081 C11orf84Q9BUA3 381 aaPredicted RBP15.85■□□□□ 0.13
CLIP4-201ENST00000320081 ACPTQ9BZG2 426 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 TM9SF3Q9HD45 589 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 ERVK13-1Q9NX77 482 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 PLCH1Q4KWH8 1693 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SDC1P18827 310 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 RSPO2Q6UXX9 243 aaPredicted RBP15.85■□□□□ 0.13
CLIP4-201ENST00000320081 FUNDC1Q8IVP5 155 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SLC15A4Q8N697 577 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 OR7G3Q8NG95 312 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 OR51G2Q8NGK0 314 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms