RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 C1orf52Q8N6N3 182 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 UBTD2Q8WUN7 234 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 DNASE1L2Q92874 299 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 MAL2Q969L2 176 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 MRGPRX3Q96LB0 322 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 ITPAQ9BY32 194 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 NUAK2Q9H093 628 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 TBC1D24Q9ULP9 559 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 MN1Q10571 1320 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 IGLV3-16A0A075B6K0 115 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 OTOL1A6NHN0 477 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 GRXCR1A8MXD5 290 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 FPGTO14772 594 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 MMP20O60882 483 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 LAMP1P11279 417 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 UGT2B10P36537 528 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 CLDN8P56748 225 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 GNG2P59768 71 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 ST8SIA6P61647 398 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 TUBA1BP68363 451 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 ZNF45Q02386 682 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 PRKCDQ05655 676 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 TCEA2Q15560 299 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 TUBA1AQ71U36 451 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 TCAIMQ8N3R3 496 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 GLB1L3Q8NCI6 653 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 SUN5Q8TC36 379 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 APH1BQ8WW43 257 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 TPD52L3Q96J77 140 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 OR4K3Q96R72 315 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 CENPOQ9BU64 300 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 SLC29A3Q9BZD2 475 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 NXF2Q9GZY0 626 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 CRISPLD2Q9H0B8 497 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 ANKHQ9HCJ1 492 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 CTDSP2O14595 271 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 AMD1P17707 334 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 ENGP17813 658 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 WASP42768 502 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 SLC6A12P48065 614 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 GPLD1P80108 840 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 FNDC3BQ53EP0 1204 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 RAET1GQ6H3X3 334 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 Q6ZPB1 254 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 HIPK1Q86Z02 1210 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 SETD9Q8NE22 299 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 GLYATL1Q969I3 302 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 GDF15Q99988 308 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 A0A0G2JMP0 313 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 ZSCAN5BA6NJL1 495 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 PRRT4C9JH25 899 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 GFYI3L273 518 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 YY2O15391 372 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 NUDT7P0C024 238 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 CXCR4P61073 352 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 LIPIQ6XZB0 460 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 TTC29Q8NA56 475 aaPredicted RBP14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 BTN2A2Q8WVV5 523 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 IL17FQ96PD4 163 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 PKP4Q99569 1192 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 RUBCNLQ9H714 662 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 STOX2Q9P2F5 926 aaPredicted RBP14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 MOSPD1Q9UJG1 213 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 WBP11Q9Y2W2 641 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 SCN8AQ9UQD0 1980 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 KCNE1BA0A087WTH5 132 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 PRR23AA6NEV1 266 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 SCAMP1O15126 338 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 S100A5P33763 92 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 TP53BP2Q13625 1128 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 ZNF77Q15935 545 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 ZNF805Q5CZA5 627 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 ZNF438Q7Z4V0 828 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 OR4K1Q8NGD4 311 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 NEIL2Q969S2 332 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 RSPRY1Q96DX4 576 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 MED30Q96HR3 178 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 FYTTD1Q96QD9 318 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 BEX2Q9BXY8 128 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 VPS29Q9UBQ0 182 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 SH2B3Q9UQQ2 575 aa14.92□□□□□ -0.02
SHROOM1-201ENST00000319854 A0A0X1KG70 313 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 LINC00854A0A1B0GVQ3 168 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 ATG13O75143 517 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 SLC19A1P41440 591 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 CTSKP43235 329 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 HNMTP50135 292 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 RFX4Q33E94 735 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 TBRG1Q3YBR2 411 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 CYP27C1Q4G0S4 372 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 HENMT1Q5T8I9 393 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 KDM4DQ6B0I6 523 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 SHQ1Q6PI26 577 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 GPR149Q86SP6 731 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 SPPL3Q8TCT6 385 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 NDRG4Q9ULP0 352 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 PPIL1Q9Y3C6 166 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 EVPLLA8MZ36 301 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 H3BM21 787 aa14.91□□□□□ -0.02
SHROOM1-201ENST00000319854 CLIC1O00299 241 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms