RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 PKP4Q99569 1192 aa12.36□□□□□ -0.43
SYCN-201ENST00000318438 MIPEPQ99797 713 aa12.36□□□□□ -0.43
SYCN-201ENST00000318438 TGIF2Q9GZN2 237 aa12.36□□□□□ -0.43
SYCN-201ENST00000318438 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
SYCN-201ENST00000318438 DPH5Q9H2P9 285 aa12.36□□□□□ -0.43
SYCN-201ENST00000318438 SYNPO2LQ9H987 977 aa12.36□□□□□ -0.43
SYCN-201ENST00000318438 MKKSQ9NPJ1 570 aaPredicted RBP12.36□□□□□ -0.43
SYCN-201ENST00000318438 MOCS1Q9NZB8 636 aa12.36□□□□□ -0.43
SYCN-201ENST00000318438 GRHL1Q9NZI5 618 aa12.36□□□□□ -0.43
SYCN-201ENST00000318438 TRPS1Q9UHF7 1281 aa12.36□□□□□ -0.43
SYCN-201ENST00000318438 UTP11Q9Y3A2 253 aaKnown RBP12.36□□□□□ -0.43
SYCN-201ENST00000318438 OR2A25A4D2G3 310 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 E7ENX8 843 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 EIF3HO15372 352 aaKnown RBP eCLIP12.35□□□□□ -0.43
SYCN-201ENST00000318438 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 SYF2O95926 243 aaKnown RBP12.35□□□□□ -0.43
SYCN-201ENST00000318438 C8GP07360 202 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 CD53P19397 219 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 RPA3P35244 121 aaPredicted RBP12.35□□□□□ -0.43
SYCN-201ENST00000318438 SLC26A3P40879 764 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 TAP2Q03519 686 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 CKAP4Q07065 602 aaKnown RBP12.35□□□□□ -0.43
SYCN-201ENST00000318438 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
SYCN-201ENST00000318438 PRTGQ2VWP7 1150 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 Q5PR19 223 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 HECTD2Q5U5R9 776 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 FAM45BPQ6NSW5 357 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 FBXO42Q6P3S6 717 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 PAQR3Q6TCH7 311 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 SUSD1Q6UWL2 747 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 C16orf47Q6ZP98 133 aaPredicted RBP12.35□□□□□ -0.43
SYCN-201ENST00000318438 UBE2R2Q712K3 238 aaPredicted RBP12.35□□□□□ -0.43
SYCN-201ENST00000318438 RNF44Q7L0R7 432 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 CPEB2Q7Z5Q1 589 aaKnown RBP12.35□□□□□ -0.43
SYCN-201ENST00000318438 SLC26A11Q86WA9 606 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 SHISA5Q8N114 240 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 MYO1HQ8N1T3 1032 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 GPATCH11Q8N954 259 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 FAM45AQ8TCE6 357 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 EEF1AKMT1Q8WVE0 214 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 METTL21AQ8WXB1 218 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 ACAT2Q9BWD1 397 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 PHACTR1Q9C0D0 580 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 VN1R1Q9GZP7 353 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 NSMCE4AQ9NXX6 385 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 CDC14AQ9UNH5 594 aa12.35□□□□□ -0.43
SYCN-201ENST00000318438 A0A0G2JNJ9 132 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 SLC16A5O15375 505 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 PRPF4O43172 522 aaKnown RBP eCLIP12.34□□□□□ -0.43
SYCN-201ENST00000318438 WIPF1O43516 503 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 IMPA1P29218 277 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 UQCRC1P31930 480 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 ZFP36L2P47974 494 aaKnown RBP12.34□□□□□ -0.43
SYCN-201ENST00000318438 EMP3P54852 163 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 IL2P60568 153 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 MAT1AQ00266 395 aaKnown RBP12.34□□□□□ -0.43
SYCN-201ENST00000318438 CAV1Q03135 178 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 PRDX1Q06830 199 aaKnown RBP12.34□□□□□ -0.43
SYCN-201ENST00000318438 ILF2Q12905 390 aaKnown RBP12.34□□□□□ -0.43
SYCN-201ENST00000318438 FLYWCH1Q4VC44 716 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 ICE2Q659A1 982 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 ARHGAP11AQ6P4F7 1023 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 WDR53Q7Z5U6 358 aaPredicted RBP12.34□□□□□ -0.43
SYCN-201ENST00000318438 ZNF227Q86WZ6 799 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 PALM2Q8IXS6 379 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 LRRC56Q8IYG6 542 aaPredicted RBP12.34□□□□□ -0.43
SYCN-201ENST00000318438 OR5M9Q8NGP3 310 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 MCOLN3Q8TDD5 553 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 PYROXD1Q8WU10 500 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 LINGO1Q96FE5 620 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 CCDC138Q96M89 665 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 Q96MF0 132 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 ZFYVE21Q9BQ24 234 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 TTYH2Q9BSA4 534 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 DPH7Q9BTV6 452 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 PLEKHF2Q9H8W4 249 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 MRPS30Q9NP92 439 aaKnown RBP12.34□□□□□ -0.43
SYCN-201ENST00000318438 PNPLA3Q9NST1 481 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 BEX4Q9NWD9 120 aaPredicted RBP12.34□□□□□ -0.43
SYCN-201ENST00000318438 Q9UFV3 132 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 TAC3Q9UHF0 121 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 ADAMTS6Q9UKP5 1117 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 VWA7Q9Y334 891 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 PSAT1Q9Y617 370 aa12.34□□□□□ -0.43
SYCN-201ENST00000318438 A0A0A6YYC8 382 aaPredicted RBP12.33□□□□□ -0.44
SYCN-201ENST00000318438 IGKV1-8A0A0C4DH67 115 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 OR2W5A6NFC9 320 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 NPIPA2E9PIF3 369 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 NPIPA3F8WFD2 350 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 H0YGG7 62 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 I3L1I5 382 aaPredicted RBP12.33□□□□□ -0.44
SYCN-201ENST00000318438 CRLF1O75462 422 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 ANXA5P08758 320 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 GLI4P10075 376 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 ARF3P61204 181 aaPredicted RBP12.33□□□□□ -0.44
SYCN-201ENST00000318438 ABATP80404 500 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 TSTA3Q13630 321 aaPredicted RBP12.33□□□□□ -0.44
SYCN-201ENST00000318438 HKDC1Q2TB90 917 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 MFSD4BQ5TF39 518 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 STRA8Q7Z7C7 330 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms