RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 NMRAL1Q9HBL8 299 aa16.66■□□□□ 0.26
TPM1-203ENST00000317516 SEC14L3Q9UDX4 400 aa16.66■□□□□ 0.26
TPM1-203ENST00000317516 MMACHCQ9Y4U1 282 aa16.66■□□□□ 0.26
TPM1-203ENST00000317516 TCRBV16S1A1N1A0A5B0 115 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 GABRR3A8MPY1 467 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 TAPBPO15533 448 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 ERI3O43414 337 aaKnown RBP16.65■□□□□ 0.26
TPM1-203ENST00000317516 B3GALT2O43825 422 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 EEF1DP29692 281 aaKnown RBP16.65■□□□□ 0.26
TPM1-203ENST00000317516 HSPA7P48741 367 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 TDGF1P3P51864 188 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 CKAP4Q07065 602 aaKnown RBP16.65■□□□□ 0.26
TPM1-203ENST00000317516 TGM3Q08188 693 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 OR1C1Q15619 314 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 PDK4Q16654 411 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 XKR6Q5GH73 641 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 HIST2H2BCQ6DN03 193 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 TRIM40Q6P9F5 258 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 TBC1D1Q86TI0 1168 aaPredicted RBP16.65■□□□□ 0.26
TPM1-203ENST00000317516 CA13Q8N1Q1 262 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 FAM98AQ8NCA5 519 aaKnown RBP16.65■□□□□ 0.26
TPM1-203ENST00000317516 MS4A6EQ96DS6 147 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 TMEM79Q9BSE2 394 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 EFCAB11Q9BUY7 163 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 REXO4Q9GZR2 422 aaKnown RBP16.65■□□□□ 0.26
TPM1-203ENST00000317516 PTBP2Q9UKA9 531 aaKnown RBP16.65■□□□□ 0.26
TPM1-203ENST00000317516 MRPS33Q9Y291 106 aaKnown RBP16.65■□□□□ 0.26
TPM1-203ENST00000317516 DOPEY1Q5JWR5 2465 aa16.65■□□□□ 0.26
TPM1-203ENST00000317516 IGKV3D-11A0A0A0MRZ8 115 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 SYNDIG1LA6NDD5 238 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 SAGE2PA6NJ88 616 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 FAM227AF5H4B4 570 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 CCNT2O60583 730 aaKnown RBP16.64■□□□□ 0.25
TPM1-203ENST00000317516 UNC5CO95185 931 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 CLDN1O95832 211 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 MAOAP21397 527 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 HSD17B7P56937 341 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 KCNK10P57789 538 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 IRF8Q02556 426 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 SLMAPQ14BN4 828 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 OR4D1Q15615 310 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 SPINK14Q6IE38 97 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 CCDC91Q7Z6B0 441 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 PDPRQ8NCN5 879 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 MDS2Q8NDY4 140 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 SRFBP1Q8NEF9 429 aaKnown RBP16.64■□□□□ 0.25
TPM1-203ENST00000317516 OR2L5Q8NG80 312 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 FBF1Q8TES7 1133 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 UBE2E3Q969T4 207 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 RELTQ969Z4 430 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 WDR34Q96EX3 536 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 DEFB126Q9BYW3 111 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 PRM3Q9NNZ6 103 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 KLHL1Q9NR64 748 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 ANKRD10Q9NXR5 420 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 LRFN1Q9P244 771 aa16.64■□□□□ 0.25
TPM1-203ENST00000317516 SCN3AQ9NY46 2000 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 FCHO1O14526 889 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 C1QAP02745 245 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 MST1P26927 711 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 HNRNPH1P31943 449 aaKnown RBP16.63■□□□□ 0.25
TPM1-203ENST00000317516 CYB561P49447 251 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 PLA2G16P53816 162 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 CASP6P55212 293 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 RUNX2Q13950 521 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 DOC2AQ14183 400 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 TBCCQ15814 346 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 KRTCAP3Q53RY4 240 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 SLC25A25Q6KCM7 469 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 LRRC70Q7Z2Q7 622 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 ZNF572Q7Z3I7 529 aaPredicted RBP16.63■□□□□ 0.25
TPM1-203ENST00000317516 FJX1Q86VR8 437 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 C17orf53Q8N3J3 647 aaPredicted RBP16.63■□□□□ 0.25
TPM1-203ENST00000317516 ESAMQ96AP7 390 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 SIGLEC12Q96PQ1 595 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 SERINC2Q96SA4 455 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 NPAS2Q99743 824 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 CD244Q9BZW8 370 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 ROGDIQ9GZN7 287 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 COPS7BQ9H9Q2 264 aaPredicted RBP16.63■□□□□ 0.25
TPM1-203ENST00000317516 NECTIN3Q9NQS3 549 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 PRTFDC1Q9NRG1 225 aa16.63■□□□□ 0.25
TPM1-203ENST00000317516 NOTCH2Q04721 2471 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 A0A0G2JN53 185 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 A8MUA0 341 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 SP1P08047 785 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 LTA4HP09960 611 aaKnown RBP16.62■□□□□ 0.25
TPM1-203ENST00000317516 TFEBP19484 476 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 CLCN2P51788 898 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 MTTPP55157 894 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 RAB38P57729 211 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 SLC13A2Q13183 592 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 CHIT1Q13231 466 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 TERF2Q15554 542 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 ZRSR2Q15696 482 aaKnown RBP16.62■□□□□ 0.25
TPM1-203ENST00000317516 ADPRMQ3LIE5 342 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 FBXO48Q5FWF7 155 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 C1QL3Q5VWW1 255 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 MTFR2Q6P444 385 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 ZDHHC24Q6UX98 284 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms