RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SSR3Q9UNL2 185 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 SLC6A5Q9Y345 797 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 ZFC3H1O60293 1989 aaKnown RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 TRBV23OR9-2A0A075B6M9 112 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 FAM234BA2RU67 622 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 OR6C74A6NCV1 312 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 G3V2T6 193 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 AIPO00170 330 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 PLA2G10O15496 165 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 NOBOXO60393 691 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 PEX10O60683 326 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 ULK1O75385 1050 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 LY86O95711 162 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 LTFP02788 710 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 GP1BAP07359 652 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 CSF3P09919 207 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 GOT1P17174 413 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 TSPAN8P19075 237 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 SSTR2P30874 369 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 GRK5P34947 590 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 MAP2K3P46734 347 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 GPR143P51810 404 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 CLDN20P56880 219 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 SERTAD2Q14140 314 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 CHRNA6Q15825 494 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 TIGD6Q17RP2 521 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 MICBQ29980 383 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 FAM83EQ2M2I3 478 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 MPEG1Q2M385 716 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 LGALSLQ3ZCW2 172 aaPredicted RBP6.4□□□□□ -1.39
ZNF540-201ENST00000316433 SOWAHCQ53LP3 525 aaPredicted RBP6.4□□□□□ -1.39
ZNF540-201ENST00000316433 FBXO47Q5MNV8 452 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 FAM109BQ6ICB4 259 aaPredicted RBP6.4□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF852Q6ZMS4 543 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 PAQR9Q6ZVX9 377 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 SHFQ7M4L6 423 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 SLC46A3Q7Z3Q1 461 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 ARHGAP12Q8IWW6 846 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 FSTL5Q8N475 847 aaPredicted RBP6.4□□□□□ -1.39
ZNF540-201ENST00000316433 EIF4E3Q8N5X7 224 aaKnown RBP6.4□□□□□ -1.39
ZNF540-201ENST00000316433 CDYL2Q8N8U2 506 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 PPHLN1Q8NEY8 458 aaKnown RBP6.4□□□□□ -1.39
ZNF540-201ENST00000316433 OR11H4Q8NGC9 324 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 OR2T4Q8NH00 348 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 RNASE11Q8TAA1 199 aaKnown RBP6.4□□□□□ -1.39
ZNF540-201ENST00000316433 UBTD2Q8WUN7 234 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 ACSF2Q96CM8 615 aaPredicted RBP6.4□□□□□ -1.39
ZNF540-201ENST00000316433 MOCOSQ96EN8 888 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 ZC3HAV1LQ96H79 300 aaKnown RBP6.4□□□□□ -1.39
ZNF540-201ENST00000316433 SIGLEC11Q96RL6 698 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 TCEAL7Q9BRU2 100 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 HTATIP2Q9BUP3 242 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 RBCK1Q9BYM8 510 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 SLC25A51Q9H1U9 297 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 MAGEL2Q9UJ55 1249 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 HACL1Q9UJ83 578 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 FBXL2Q9UKC9 423 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 CDH9Q9ULB4 789 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 V9GYQ6 96 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 EVPLQ92817 2033 aa6.4□□□□□ -1.39
ZNF540-201ENST00000316433 TRAV19A0A0A6YYK7 116 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 LOC285095A0A1B0GVY8 99 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 TCRBV16S1A1N1A0A5B0 115 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 M0R082 166 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 BCKDKO14874 412 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 SLC16A6O15403 523 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 ORC5O43913 435 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 SLC43A1O75387 559 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 VPS26AO75436 327 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 CREG1O75629 220 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 GPX5O75715 221 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 RECQL5O94762 991 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-201ENST00000316433 RECKO95980 971 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 PEX11BO96011 259 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 LGALS2P05162 132 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 SPP1P10451 314 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 GNSP15586 552 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 RPS2P15880 293 aaKnown RBP6.39□□□□□ -1.39
ZNF540-201ENST00000316433 HOXB9P17482 250 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-201ENST00000316433 TAF6P49848 677 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 XKP51811 444 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 MAZP56270 477 aaKnown RBP6.39□□□□□ -1.39
ZNF540-201ENST00000316433 EMX2Q04743 252 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 WSCD2Q2TBF2 565 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 NHLRC3Q5JS37 347 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 PRAMEF19Q5SWL8 479 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF678Q5SXM1 525 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF470Q6ECI4 717 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 BLOC1S3Q6QNY0 202 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 KDELC2Q7Z4H8 507 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 KDF1Q8NAX2 398 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-201ENST00000316433 SETD9Q8NE22 299 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 PHOSPHO1Q8TCT1 267 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 C2CD4CQ8TF44 421 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 GLYATL2Q8WU03 294 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 LRCH3Q96II8 777 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 CPB2Q96IY4 423 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 SERINC2Q96SA4 455 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 RHNO1Q9BSD3 238 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 SLC29A3Q9BZD2 475 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms