RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 GSTM5P46439 218 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 HEPACAMQ14CZ8 416 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 PTCRAQ6ISU1 281 aaPredicted RBP20.27■□□□□ 0.84
ATG4D-201ENST00000309469 ZNF425Q6IV72 752 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 TRIML2Q8N7C3 387 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 FRMD1Q8N878 549 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 AICDAQ9GZX7 198 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 CAAP1Q9H8G2 361 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 TAS2R9Q9NYW1 312 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 ZNF639Q9UID6 485 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 AP1M2Q9Y6Q5 423 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 TMPRSS11DO60235 418 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 HOXB3P14651 431 aaPredicted RBP20.27■□□□□ 0.84
ATG4D-201ENST00000309469 HOXB6P17509 224 aaKnown RBP20.27■□□□□ 0.84
ATG4D-201ENST00000309469 PLA2G16P53816 162 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 VEZF1Q14119 521 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 C16orf72Q14CZ0 275 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 PRRT3Q5FWE3 981 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 NHSL2Q5HYW2 709 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 IYDQ6PHW0 289 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.27■□□□□ 0.84
ATG4D-201ENST00000309469 ST13P4Q8IZP2 240 aaPredicted RBP20.27■□□□□ 0.84
ATG4D-201ENST00000309469 GPBAR1Q8TDU6 330 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 SLC35A5Q9BS91 424 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 SAMD4AQ9UPU9 718 aaKnown RBP20.27■□□□□ 0.84
ATG4D-201ENST00000309469 KLHL20Q9Y2M5 609 aa20.27■□□□□ 0.84
ATG4D-201ENST00000309469 UPK1AO00322 258 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 KDELR2P33947 212 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 NUDT1P36639 197 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 EIF2B5Q13144 721 aaKnown RBP20.26■□□□□ 0.83
ATG4D-201ENST00000309469 FZD5Q13467 585 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 LEXMQ3ZCV2 418 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.26■□□□□ 0.83
ATG4D-201ENST00000309469 NAGSQ8N159 534 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 RLN3Q8WXF3 142 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 SLC22A18Q96BI1 424 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 TEFMQ96QE5 360 aaKnown RBP20.26■□□□□ 0.83
ATG4D-201ENST00000309469 C17orf62Q9BQA9 187 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 TCEAL2Q9H3H9 227 aaPredicted RBP20.26■□□□□ 0.83
ATG4D-201ENST00000309469 KLHL31Q9H511 634 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 DNAJB9Q9UBS3 223 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 UTS2RQ9UKP6 389 aa20.26■□□□□ 0.83
ATG4D-201ENST00000309469 SPTY2D1-AS1A0A0U1RR47 76 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 PPM1DO15297 605 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 ZNF217O75362 1048 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 NUDT7P0C024 238 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 LINGO3P0C6S8 592 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 THEGLP0DJG4 465 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 ZNF23P17027 643 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 ALDH9A1P49189 494 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 MVDP53602 400 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 TRA2BP62995 288 aaKnown RBP20.25■□□□□ 0.83
ATG4D-201ENST00000309469 HYAL2Q12891 473 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 ADPRMQ3LIE5 342 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 NATD1Q8N6N6 113 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 AMER3Q8N944 861 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 MFSD9Q8NBP5 474 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 GPR27Q9NS67 375 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 GPATCH2Q9NW75 528 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 MRPS17Q9Y2R5 130 aaKnown RBP20.25■□□□□ 0.83
ATG4D-201ENST00000309469 PCDHGA4Q9Y5G9 962 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 A0A0A6YYD5 115 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 A0A0G2JN53 185 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 A0A1W2PPC4 97 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 DLGAP1O14490 977 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 EI24O14681 340 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 STATHP02808 62 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 DDX5P17844 614 aaKnown RBP20.25■□□□□ 0.83
ATG4D-201ENST00000309469 SSR2P43308 183 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 GK3PQ14409 553 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 KIR2DS3Q14952 304 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 UBXN2BQ14CS0 331 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 PLCL1Q15111 1095 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 LRRC23Q53EV4 343 aaPredicted RBP20.25■□□□□ 0.83
ATG4D-201ENST00000309469 CHERPQ8IWX8 916 aaKnown RBP20.25■□□□□ 0.83
ATG4D-201ENST00000309469 TRIM48Q8IWZ4 208 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 FAM160A2Q8N612 972 aaPredicted RBP20.25■□□□□ 0.83
ATG4D-201ENST00000309469 OR52N2Q8NGI0 321 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 MS4A6EQ96DS6 147 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 MACROD1Q9BQ69 325 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 GSDMCQ9BYG8 508 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 TPSD1Q9BZJ3 242 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 TRIM4Q9C037 500 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 ABCG4Q9H172 646 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 PCDHGB5Q9Y5G0 923 aa20.25■□□□□ 0.83
ATG4D-201ENST00000309469 IGHV1OR15-9A0A0B4J2B8 117 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 CST1P01037 141 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 CRATP43155 626 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 TXNL4AP83876 142 aaKnown RBP20.24■□□□□ 0.83
ATG4D-201ENST00000309469 FZD2Q14332 565 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 ZNF542PQ5EBM4 170 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 TMEM214Q6NUQ4 689 aaKnown RBP20.24■□□□□ 0.83
ATG4D-201ENST00000309469 ANGPTL8Q6UXH0 198 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 FKBP9P1Q75LS8 142 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 PAQR7Q86WK9 346 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 ZFPM2Q8WW38 1151 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 TMBIM1Q969X1 311 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 TWSG1Q9GZX9 223 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 RPS6KA6Q9UK32 745 aa20.24■□□□□ 0.83
ATG4D-201ENST00000309469 FAF1Q9UNN5 650 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms