RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ZNF45Q02386 682 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 RUNX3Q13761 415 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 ARHGEF7Q14155 803 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 PNCKQ6P2M8 343 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 GALNT5Q7Z7M9 940 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 YAF2Q8IY57 180 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 PHACTR4Q8IZ21 702 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 TDHQ8IZJ6 230 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 LIX1Q8N485 282 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 TTC29Q8NA56 475 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 LHFPL5Q8TAF8 219 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 MAP6Q96JE9 813 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 OR52E6Q96RD3 313 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 HBEGFQ99075 208 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 CDCA3Q99618 268 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 ITPAQ9BY32 194 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZNF576Q9H609 170 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 IL1RAPQ9NPH3 570 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 DZANK1Q9NVP4 752 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 WDR70Q9NW82 654 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 U3KQV3 271 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 hCG_2039718K7EN88 272 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 SLC25A14O95258 325 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 PRKACAP17612 351 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 XPAP23025 273 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 OPRD1P41143 372 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 PRKCDQ05655 676 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 DGCR6Q14129 220 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZNF234Q14588 700 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 PROX2Q3B8N5 592 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 TTLL9Q3SXZ7 439 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 ESCO2Q56NI9 601 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 ATAD3CQ5T2N8 411 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 METTL2BQ6P1Q9 378 aaKnown RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 SBSNQ6UWP8 590 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 SERPINA13PQ6UXR4 307 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 CEP68Q76N32 757 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 TMEM132CQ8N3T6 1108 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 LINC00469Q8N7U9 141 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 BEND7Q8N7W2 519 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZNF557Q8N988 423 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 MCCC1Q96RQ3 725 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 P2RY12Q9H244 342 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 ABCB10Q9NRK6 738 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 TRPS1Q9UHF7 1281 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 VPS4AQ9UN37 437 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 KIF26AQ9ULI4 1882 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 FFAR2O15552 330 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 KCNK2O95069 426 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 MFN2O95140 757 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 SEMG1P04279 462 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 YES1P07947 543 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 LAMP2P13473 410 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 ACRV1P26436 265 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 SPINT3P49223 89 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 DEFA1P59665 94 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 DEFA3P59666 94 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 POLR2LP62875 67 aaKnown RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 SLC13A2Q13183 592 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 ADAM15Q13444 863 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 C18orf21Q32NC0 220 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 GTDC1Q4AE62 458 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 USP39Q53GS9 565 aaKnown RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 KIAA1614Q5VZ46 1190 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 PARS2Q7L3T8 475 aaKnown RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 FBXL6Q8N531 539 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 POC5Q8NA72 575 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 OR10Z1Q8NGY1 313 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 RPL3LQ92901 407 aaKnown RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 ITCHQ96J02 903 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 LYSMD1Q96S90 227 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 BARD1Q99728 777 aaKnown RBP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 ACAT2Q9BWD1 397 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 LRTM1Q9HBL6 345 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 SERHLQ9NQF3 203 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 HCN2Q9UL51 889 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 TMPRSS11EQ9UL52 423 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 SLC27A6Q9Y2P4 619 aa9.92□□□□□ -0.82
APOBEC3F-201ENST00000308521 TRIM77I1YAP6 450 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 TAPBPO15533 448 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 DPM1O60762 260 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 KCNJ13O60928 360 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 SNX4O95219 450 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZNF7P17097 686 aaPredicted RBP9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 IGFBP4P22692 258 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 KRT20P35900 424 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 IL12RB1P42701 662 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 CLK1P49759 484 aaKnown RBP9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZNF805Q5CZA5 627 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 C9orf64Q5T6V5 341 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 FAM205BPQ63HN1 556 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 STEAP3Q658P3 488 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 SUSD1Q6UWL2 747 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZNF767PQ75MW2 155 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 NXPE1Q8N323 547 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 KRTCAP2Q8N6L1 136 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 UBTD2Q8WUN7 234 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 HTRA1Q92743 480 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms