RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 JPH3Q8WXH2 748 aaPredicted RBP11.34□□□□□ -0.59
TRIM40-205ENST00000307859 RGMAQ96B86 450 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 PPCDCQ96CD2 204 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 ZNF764Q96H86 408 aaPredicted RBP11.34□□□□□ -0.59
TRIM40-205ENST00000307859 SLC6A18Q96N87 628 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 BTBD9Q96Q07 612 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 CENPKQ9BS16 269 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 DPH7Q9BTV6 452 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 AICDAQ9GZX7 198 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 TCEAL2Q9H3H9 227 aaPredicted RBP11.34□□□□□ -0.59
TRIM40-205ENST00000307859 SRMSQ9H3Y6 488 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 POT1Q9NUX5 634 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 SH3BP4Q9P0V3 963 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 TAAR2Q9P1P5 351 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 CNOT11Q9UKZ1 510 aaKnown RBP11.34□□□□□ -0.59
TRIM40-205ENST00000307859 AURKCQ9UQB9 309 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 AP1M2Q9Y6Q5 423 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 ABCA7Q8IZY2 2146 aa11.34□□□□□ -0.59
TRIM40-205ENST00000307859 GON4LQ3T8J9 2241 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 LRIT2A6NDA9 550 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 EVPLLA8MZ36 301 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 BTN3A3O00478 584 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 GMNNO75496 209 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 CPSF4O95639 269 aaKnown RBP11.33□□□□□ -0.6
TRIM40-205ENST00000307859 RETP07949 1114 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 BMP2P12643 396 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 ENGP17813 658 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 PPIBP23284 216 aaKnown RBP11.33□□□□□ -0.6
TRIM40-205ENST00000307859 SOX11P35716 441 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 ARFIP1P53367 373 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 MAPK12P53778 367 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 UBE2IP63279 158 aaKnown RBP11.33□□□□□ -0.6
TRIM40-205ENST00000307859 KLC1Q07866 573 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 KIR2DS3Q14952 304 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 MPEG1Q2M385 716 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 CCNYL2Q5T2Q4 361 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 ZNF621Q6ZSS3 439 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 PARGQ86W56 976 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 PAQR7Q86WK9 346 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 DCP2Q8IU60 420 aaKnown RBP11.33□□□□□ -0.6
TRIM40-205ENST00000307859 C1orf210Q8IVY1 113 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 TBC1D19Q8N5T2 526 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 ANKFN1Q8N957 763 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 MFSD9Q8NBP5 474 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 CLDN23Q96B33 292 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 SLC22A18Q96BI1 424 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 KLHDC7BQ96G42 594 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 TBCDQ9BTW9 1192 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 CAAP1Q9H8G2 361 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 DDX31Q9H8H2 851 aaKnown RBP11.33□□□□□ -0.6
TRIM40-205ENST00000307859 AGPAT4Q9NRZ5 378 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 ZNF282Q9UDV7 671 aaPredicted RBP11.33□□□□□ -0.6
TRIM40-205ENST00000307859 RALYQ9UKM9 306 aaKnown RBP11.33□□□□□ -0.6
TRIM40-205ENST00000307859 VPS4AQ9UN37 437 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 SNX7Q9UNH6 387 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 SLCO1B1Q9Y6L6 691 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 THADAQ6YHU6 1953 aa11.33□□□□□ -0.6
TRIM40-205ENST00000307859 SCN3AQ9NY46 2000 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 KIR2DS5A0A0G2JLQ3 304 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 A0A0G2JNG1 304 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 FAM221BA6H8Z2 402 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 OR5K4A6NMS3 321 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 ISM1B1AKI9 464 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 KIR2DS3K7RE56 304 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 RTCAO00442 366 aaKnown RBP11.32□□□□□ -0.6
TRIM40-205ENST00000307859 CXCR6O00574 342 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 GSTA4O15217 222 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 C1QCP02747 245 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 CD27P26842 260 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 BLKP51451 505 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 TRA2BP62995 288 aaKnown RBP11.32□□□□□ -0.6
TRIM40-205ENST00000307859 HYAL2Q12891 473 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 GAB1Q13480 694 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 GPR18Q14330 331 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 KIR2DS5Q14953 304 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 PRSS53Q2L4Q9 553 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 CPZQ66K79 652 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 AMIGO2Q86SJ2 522 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 TRIM48Q8IWZ4 208 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 SPEM1Q8N4L4 309 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 MFSD2AQ8NA29 543 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 CADM4Q8NFZ8 388 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 ZFP90Q8TF47 636 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 FIG4Q92562 907 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 POP5Q969H6 163 aaKnown RBP11.32□□□□□ -0.6
TRIM40-205ENST00000307859 TM4SF18Q96CE8 201 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 SPATA9Q9BWV2 254 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 SEMA6AQ9H2E6 1030 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 TBC1D17Q9HA65 648 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 TPT1P8Q9HAU6 139 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 DLGAP2Q9P1A6 1054 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 CPNE7Q9UBL6 633 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 CORO2BQ9UQ03 480 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 SPAG17Q6Q759 2223 aa11.32□□□□□ -0.6
TRIM40-205ENST00000307859 TRBV23OR9-2A0A075B6M9 112 aa11.31□□□□□ -0.6
TRIM40-205ENST00000307859 A0A0A6YYD5 115 aa11.31□□□□□ -0.6
TRIM40-205ENST00000307859 A0A1W2PR77 199 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms