RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TMX2-CTNND1H3BSU7 103 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 INPPL1O15357 1258 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 VIPR1P32241 457 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 RYKP34925 604 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 ARPC4P59998 168 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 LARS2Q15031 903 aaKnown RBP12.79□□□□□ -0.36
DDX54-201ENST00000306014 SPHARQ15513 63 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 NUDT13Q86X67 352 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 OR9Q2Q8NGE9 314 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 TTYH2Q9BSA4 534 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 TSSK6Q9BXA6 273 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 OR51E2Q9H255 320 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 SMURF1Q9HCE7 757 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.79□□□□□ -0.36
DDX54-201ENST00000306014 ADAMTSL1Q8N6G6 1762 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 TRBV23OR9-2A0A075B6M9 112 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 A0A1W2PQ72 361 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 ANKRD33BA6NCL7 494 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 A8MU76 341 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 NOS1APO75052 506 aaPredicted RBP12.79□□□□□ -0.36
DDX54-201ENST00000306014 POP7O75817 140 aaKnown RBP12.79□□□□□ -0.36
DDX54-201ENST00000306014 CD40LGP29965 261 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 RCVRNP35243 200 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 HOXD12P35452 270 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 PGFP49763 221 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 KEAP1Q14145 624 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 IQCHQ86VS3 1027 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 HUS1BQ8NHY5 278 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 BCL7BQ9BQE9 202 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 TMEM246Q9BRR3 403 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 IRF2BPLQ9H1B7 796 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 SLCO3A1Q9UIG8 710 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 PLAGL1Q9UM63 463 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 WNK3Q9BYP7 1800 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 NOTOA8MTQ0 251 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 UPK1BO75841 260 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 OXSR1O95747 527 aaPredicted RBP12.78□□□□□ -0.36
DDX54-201ENST00000306014 CRISP1P54107 249 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 ADARB1P78563 741 aaKnown RBP12.78□□□□□ -0.36
DDX54-201ENST00000306014 CAP1Q01518 475 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 RGS1Q08116 209 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 XKR4Q5GH76 650 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.78□□□□□ -0.36
DDX54-201ENST00000306014 IER5LQ5T953 404 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 DESI1Q6ICB0 168 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 AMZ2Q86W34 360 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 RNF175Q8N4F7 328 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 ASCC1Q8N9N2 400 aaKnown RBP12.78□□□□□ -0.36
DDX54-201ENST00000306014 OR6Q1Q8NGQ2 317 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 OR10G6Q8NH81 332 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 SLC5A11Q8WWX8 675 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 WACQ9BTA9 647 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 ACOT13Q9NPJ3 140 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 B3GNT3Q9Y2A9 372 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 PCDHGB6Q9Y5F9 930 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 PRSS21Q9Y6M0 314 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 FXYD1O00168 92 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 SMAD6O43541 496 aaKnown RBP12.78□□□□□ -0.36
DDX54-201ENST00000306014 RB1P06400 928 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 GSTT2P0CG29 244 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 GSTT2BP0CG30 244 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 CPN2P22792 545 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 KELP23276 732 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 TACR1P25103 407 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 PSMD8P48556 350 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 SMSP52788 366 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 MORN1Q5T089 497 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 FAM46CQ5VWP2 391 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 Q6ZPB1 254 aaPredicted RBP12.78□□□□□ -0.36
DDX54-201ENST00000306014 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 MUL1Q969V5 352 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 CXorf40BQ96DE9 158 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 RTP3Q9BQQ7 232 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
DDX54-201ENST00000306014 OR10H2O60403 315 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 PTNP21246 168 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 MCCD1P59942 119 aaPredicted RBP12.78□□□□□ -0.36
DDX54-201ENST00000306014 TMEM115Q12893 351 aaPredicted RBP12.78□□□□□ -0.36
DDX54-201ENST00000306014 GINS1Q14691 196 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 CLLU1OSQ5K130 101 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 PXYLP1Q8TE99 480 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 CLMPQ9H6B4 373 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 LTB4R2Q9NPC1 389 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 HSPB11Q9Y547 144 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 CNTRLQ7Z7A1 2325 aa12.78□□□□□ -0.36
DDX54-201ENST00000306014 ABHD14A-ACY1A0A1B0GW23 586 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 SLC35F4A4IF30 521 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 DLGAP1O14490 977 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 SEC14L2O76054 403 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 ADH1CP00326 375 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 EPHX1P07099 455 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 HOXC13P31276 330 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 CNR2P34972 360 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 CTNNB1P35222 781 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 KHKP50053 298 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 ZNF783Q6ZMS7 281 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 ZNF438Q7Z4V0 828 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 MEIOBQ8N635 442 aa12.77□□□□□ -0.36
DDX54-201ENST00000306014 KREMEN2Q8NCW0 462 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms