RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TDRKHQ9Y2W6 561 aaKnown RBP20.04■□□□□ 0.8
SMCO4-201ENST00000298966 PPP6CO00743 305 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 SDHDO14521 159 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 SLC22A2O15244 555 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 ATP5HO75947 161 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 PCSK2P16519 638 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 POU3F2P20265 443 aaPredicted RBP20.03■□□□□ 0.8
SMCO4-201ENST00000298966 SHMT2P34897 504 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 RRADP55042 308 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 LAPTM5Q13571 262 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 VWA5B1Q5TIE3 1220 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 CLEC6AQ6EIG7 209 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 LETMD1Q6P1Q0 360 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 MED25Q71SY5 747 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 TMEM102Q8N9M5 508 aaPredicted RBP20.03■□□□□ 0.8
SMCO4-201ENST00000298966 OR2L8Q8NGY9 312 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 WDR34Q96EX3 536 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 MAP3K3Q99759 626 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 EFCAB11Q9BUY7 163 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 NMUR2Q9GZQ4 415 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 INTS7Q9NVH2 962 aaKnown RBP20.03■□□□□ 0.8
SMCO4-201ENST00000298966 ASF1BQ9NVP2 202 aa20.03■□□□□ 0.8
SMCO4-201ENST00000298966 POLEQ07864 2286 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 FBN2P35556 2912 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 SERTM1A2A2V5 107 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 ANKUB1A6NFN9 424 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 SKAP2O75563 359 aaPredicted RBP20.02■□□□□ 0.8
SMCO4-201ENST00000298966 CAPN1P07384 714 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 RAB40ALP0C0E4 278 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 ITGA1P56199 1179 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 HSD11B2P80365 405 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 IRF8Q02556 426 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 SMU1Q2TAY7 513 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 PAGE2BQ5JRK9 111 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 PRAMEF13Q5VWM6 474 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 ZNF517Q6ZMY9 492 aaPredicted RBP20.02■□□□□ 0.8
SMCO4-201ENST00000298966 CISD2Q8N5K1 135 aaKnown RBP20.02■□□□□ 0.8
SMCO4-201ENST00000298966 ENDOVQ8N8Q3 282 aaKnown RBP20.02■□□□□ 0.8
SMCO4-201ENST00000298966 CDYL2Q8N8U2 506 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 OR8K5Q8NH50 307 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 PYCR2Q96C36 320 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 REPS1Q96D71 796 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 CD180Q99467 661 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 SMAD5Q99717 465 aaKnown RBP20.02■□□□□ 0.8
SMCO4-201ENST00000298966 MENTQ9BUN1 341 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 PITHD1Q9GZP4 211 aaPredicted RBP20.02■□□□□ 0.8
SMCO4-201ENST00000298966 TXLNGQ9NUQ3 528 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 OR6C2Q9NZP2 312 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 C5AR2Q9P296 337 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 FIS1Q9Y3D6 152 aa20.02■□□□□ 0.8
SMCO4-201ENST00000298966 SPTBP11277 2137 aa20.02■□□□□ 0.79
SMCO4-201ENST00000298966 TLCD2A6NGC4 264 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 SLC28A1O00337 649 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 HNRNPCL1O60812 293 aaKnown RBP20.01■□□□□ 0.79
SMCO4-201ENST00000298966 WFS1O76024 890 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 EPORP19235 508 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 PRDX3P30048 256 aaKnown RBP20.01■□□□□ 0.79
SMCO4-201ENST00000298966 PKLRP30613 574 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 CHIT1Q13231 466 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 PLEKHN1Q494U1 663 aaPredicted RBP20.01■□□□□ 0.79
SMCO4-201ENST00000298966 TMTC4Q5T4D3 741 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 GRHL2Q6ISB3 625 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 D2HGDHQ8N465 521 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 UBE2E3Q969T4 207 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 PTCD3Q96EY7 689 aaKnown RBP20.01■□□□□ 0.79
SMCO4-201ENST00000298966 LRFN5Q96NI6 719 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 OR52B2Q96RD2 323 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 TCFL5Q9UL49 500 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 CFAP20Q9Y6A4 193 aaKnown RBP20.01■□□□□ 0.79
SMCO4-201ENST00000298966 SEC16AO15027 2179 aa20.01■□□□□ 0.79
SMCO4-201ENST00000298966 PIP5K1BO14986 540 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 ULK1O75385 1050 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 CCNDBP1O95273 360 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 JUNP05412 331 aaKnown RBP20■□□□□ 0.79
SMCO4-201ENST00000298966 NPPBP16860 134 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 CXCR2P25025 360 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 FOXA1P55317 472 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 PLCL1Q15111 1095 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 SPRED3Q2MJR0 410 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 LSM12Q3MHD2 195 aaKnown RBP20■□□□□ 0.79
SMCO4-201ENST00000298966 XKR7Q5GH72 579 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 ATG9BQ674R7 924 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 OGFOD2Q6N063 350 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 PARP9Q8IXQ6 854 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 DDIASQ8IXT1 998 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 OR52E1Q8NGJ3 308 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 SLC5A11Q8WWX8 675 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 SLC22A18Q96BI1 424 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 OR4K3Q96R72 315 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 NLNQ9BYT8 704 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 WDR55Q9H6Y2 383 aaPredicted RBP20■□□□□ 0.79
SMCO4-201ENST00000298966 PELI2Q9HAT8 420 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 TSC22D4Q9Y3Q8 395 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 PCDHGA11Q9Y5H2 935 aa20■□□□□ 0.79
SMCO4-201ENST00000298966 KCNE1BA0A087WTH5 132 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 CAPN14A8MX76 684 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 H0YIV9 168 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 MEN1O00255 615 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 HNRNPRO43390 633 aaKnown RBP19.99■□□□□ 0.79
SMCO4-201ENST00000298966 RGS14O43566 566 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms