RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 WASHC2DQ5SRD0 308 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ZBTB37Q5TC79 503 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 TIPARPQ7Z3E1 657 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 REC114Q7Z4M0 266 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ADCK2Q7Z695 626 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 UBE3DQ7Z6J8 389 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ZFAND4Q86XD8 727 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 PDSS2Q86YH6 399 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 CPAMD8Q8IZJ3 1885 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 AFAP1L2Q8N4X5 818 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 CCNYL1Q8N7R7 359 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 CCDC63Q8NA47 563 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 GOLM1Q8NBJ4 401 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 KCT2Q8NC54 265 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 OR7G3Q8NG95 312 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 NT5CQ8TCD5 201 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ZNF473Q8WTR7 871 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 UTP4Q969X6 686 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 GRAMD1AQ96CP6 724 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 PTCD3Q96EY7 689 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 EAF1Q96JC9 268 aaPredicted RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 TAAR9Q96RI9 348 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ZNF382Q96SR6 550 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 CMKLR1Q99788 373 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 SELENOSQ9BQE4 189 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 DDA1Q9BW61 102 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ZNF717Q9BY31 904 aaPredicted RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 IQCGQ9H095 443 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 STMN4Q9H169 189 aaPredicted RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 RHBGQ9H310 441 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 NT5DC2Q9H857 520 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 LHX9Q9NQ69 397 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 SLC22A11Q9NSA0 550 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 FARSBQ9NSD9 589 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 TRPS1Q9UHF7 1281 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 PLCL2Q9UPR0 1127 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 RUVBL1Q9Y265 456 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 PCDHGB7Q9Y5F8 929 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 PCDHGA8Q9Y5G5 932 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 PCDHGA3Q9Y5H0 932 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 PTGDR2Q9Y5Y4 395 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 AP1M2Q9Y6Q5 423 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ITPR1Q14643 2758 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 MAGEB17A8MXT2 336 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 H0YIV9 168 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 TAF4O00268 1085 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 MANBAO00462 879 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 FFAR3O14843 346 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 POLR1CO15160 346 aaPredicted RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 NVLO15381 856 aaKnown RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 GPR42O15529 346 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 ZSCAN9O15535 394 aaPredicted RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 ZNF749O43361 778 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 UGDHO60701 494 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 SH3BGRLO75368 114 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 OR2B3O76000 313 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 KIAA0754O94854 1291 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 KLHL18O94889 574 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 CLDN9O95484 217 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 PDYNP01213 254 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 NTRK1P04629 796 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 JUNP05412 331 aaKnown RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 CAPN1P07384 714 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 JMJD7P0C870 316 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 SMIM10L1P0DMW3 83 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 NR1D1P20393 614 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 AHRP35869 848 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 NEK2P51955 445 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 EFNA3P52797 238 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 FOXL2P58012 376 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 PPP2R2AP63151 447 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 ACY1Q03154 408 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 BST1Q10588 318 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 SRSF6Q13247 344 aaKnown RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 RCN2Q14257 317 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 IL11RAQ14626 422 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 NAA25Q14CX7 972 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 RBBP5Q15291 538 aaKnown RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 ZRSR2Q15696 482 aaKnown RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 CPSF6Q16630 551 aaKnown RBP eCLIP5.6□□□□□ -1.51
SSX3-201ENST00000298396 ADPRMQ3LIE5 342 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 UGT3A2Q3SY77 523 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 ARL13AQ5H913 290 aaPredicted RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 ZC3H12BQ5HYM0 836 aaKnown RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 WIPI1Q5MNZ9 446 aaPredicted RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 TMTC4Q5T4D3 741 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 HHATQ5VTY9 493 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 LIPJQ5W064 366 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 CLEC6AQ6EIG7 209 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 CDPF1Q6NVV7 123 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 FAM198BQ6UWH4 519 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 TMIGD1Q6UXZ0 262 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 CEACAM20Q6UY09 585 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 ZNF517Q6ZMY9 492 aaPredicted RBP5.6□□□□□ -1.51
SSX3-201ENST00000298396 ZNF793Q6ZN11 406 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 GPRIN3Q6ZVF9 776 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 COX15Q7KZN9 410 aa5.6□□□□□ -1.51
SSX3-201ENST00000298396 MILR1Q7Z6M3 343 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms