RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 LIMS1P48059 325 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 PRIM2P49643 509 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 DEFB103AP81534 67 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 LRRC74AQ0VAA2 488 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 SLBPQ14493 270 aaKnown RBP eCLIP15.95■□□□□ 0.14
RPN1-201ENST00000296255 ZNF284Q2VY69 593 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 ZNF658BQ4V348 819 aaPredicted RBP15.95■□□□□ 0.14
RPN1-201ENST00000296255 STEAP3Q658P3 488 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 NLRP8Q86W28 1048 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.95■□□□□ 0.14
RPN1-201ENST00000296255 NLGN4XQ8N0W4 816 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 SLAIN1Q8ND83 568 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 DENND6BQ8NEG7 585 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 C16orf78Q8WTQ4 265 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 MRGPRX3Q96LB0 322 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 CENPOQ9BU64 300 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 SPNS1Q9H2V7 528 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 TMEM38AQ9H6F2 299 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 DMRT3Q9NQL9 472 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 MS4A12Q9NXJ0 267 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 QPCTLQ9NXS2 382 aa15.95■□□□□ 0.14
RPN1-201ENST00000296255 CFAP20Q9Y6A4 193 aaKnown RBP15.95■□□□□ 0.14
RPN1-201ENST00000296255 TSPAN11A1L157 253 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 TAF4O00268 1085 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 QSOX1O00391 747 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 TBX1O43435 398 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 GPR37L1O60883 481 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 RECKO95980 971 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 RPLP0P05388 317 aaKnown RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 C8AP07357 584 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 TYRP14679 529 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 TMED10P49755 219 aaKnown RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 CYP4F2P78329 520 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 CDK6Q00534 326 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 MEF2AQ02078 507 aaPredicted RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 RBBP4Q09028 425 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 C2orf80Q0P641 193 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 CDC20Q12834 499 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 TSTA3Q13630 321 aaPredicted RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 ARMCX4Q5H9R4 360 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 C10orf62Q5T681 223 aaPredicted RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 SYTL1Q8IYJ3 562 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 STX19Q8N4C7 294 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 FAM83FQ8NEG4 500 aaPredicted RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 B3GNT7Q8NFL0 401 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 GTPBP3Q969Y2 492 aaKnown RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 HHIPL1Q96JK4 782 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 COL21A1Q96P44 957 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 VPS35Q96QK1 796 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 EHD1Q9H4M9 534 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 ANKMY1Q9P2S6 941 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 ZNF229Q9UJW7 825 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 LAG3P18627 525 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 PTX3P26022 381 aaPredicted RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 RGS6P49758 472 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 TEKQ02763 1124 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 FOXD4Q12950 439 aaPredicted RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 NOGQ13253 232 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 DOC2BQ14184 412 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 ELOAQ14241 798 aaKnown RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 GANABQ14697 944 aaKnown RBP15.94■□□□□ 0.14
RPN1-201ENST00000296255 CRB2Q5IJ48 1285 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 FAM71E1Q6IPT2 247 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 CNKSR3Q6P9H4 555 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 TUBA3EQ6PEY2 450 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 MMP21Q8N119 569 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 DEPDC4Q8N2C3 294 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 HTRA1Q92743 480 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 IRF7Q92985 503 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 PPCDCQ96CD2 204 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 TCEAL4Q96EI5 215 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 WDR34Q96EX3 536 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 ABHD8Q96I13 439 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 FAM129BQ96TA1 746 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 PIP5K1AQ99755 562 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 ITM2BQ9Y287 266 aa15.94■□□□□ 0.14
RPN1-201ENST00000296255 PIPSLA2A3N6 862 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 FOXE1O00358 373 aaPredicted RBP15.93■□□□□ 0.14
RPN1-201ENST00000296255 CCL16O15467 120 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 SEPHS1P49903 392 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 TAS2R50P59544 299 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 GRIN2CQ14957 1233 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 PTGES3Q15185 160 aaKnown RBP15.93■□□□□ 0.14
RPN1-201ENST00000296255 FBXO43Q4G163 708 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 TPRG1LQ5T0D9 272 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 LILRA6Q6PI73 481 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 DPPA4Q7L190 304 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 LAS2Q8IYD9 372 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 OXR1Q8N573 874 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 AP2M1Q96CW1 435 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 REPS1Q96D71 796 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 FOPNLQ96NB1 174 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 WRAP53Q9BUR4 548 aaKnown RBP15.93■□□□□ 0.14
RPN1-201ENST00000296255 SP140LQ9H930 580 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.93■□□□□ 0.142e-6■■■■□ 20.6
RPN1-201ENST00000296255 DUSP12Q9UNI6 340 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 WDR37Q9Y2I8 494 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 PCDHGA4Q9Y5G9 962 aa15.93■□□□□ 0.14
RPN1-201ENST00000296255 A3GALT2U3KPV4 340 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms