RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 NAE1Q13564 534 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 CBX2Q14781 532 aaPredicted RBP12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 OTOP2Q7RTS6 562 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 SLC22A16Q86VW1 577 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 P2RY8Q86VZ1 359 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 PTOV1Q86YD1 416 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 LINC00518Q8N0U6 118 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 NAGSQ8N159 534 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 FAM83FQ8NEG4 500 aaPredicted RBP12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 CYB5D2Q8WUJ1 264 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 ZNF641Q96N77 438 aaPredicted RBP12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 CCDC115Q96NT0 180 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 TTLL2Q9BWV7 592 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 SORBS1Q9BX66 1292 aaKnown RBP12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 POLR1CO15160 346 aaPredicted RBP12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 TBX1O43435 398 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 INHAP05111 366 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 URODP06132 367 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 JUNBP17275 347 aaPredicted RBP12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 PDHA2P29803 388 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 SLC9A3P48764 834 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 CLDN8P56748 225 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 IRF8Q02556 426 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 SHQ1Q6PI26 577 aaKnown RBP12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 CCDC28AQ8IWP9 274 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 FAM217AQ8IXS0 508 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 LEMD2Q8NC56 503 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 OR9Q2Q8NGE9 314 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 OR6S1Q8NH40 331 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 ZNF461Q8TAF7 563 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 CHPT1Q8WUD6 406 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 COL26A1Q96A83 441 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 PDLIM5Q96HC4 596 aaKnown RBP12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 GPR83Q9NYM4 423 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 B4GALT6Q9UBX8 382 aa12.76□□□□□ -0.37
KCNIP3-201ENST00000295225 ANTXRLA6NF34 631 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 EVPLLA8MZ36 301 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 ATP6V1G2-DDX39BF2Z307 99 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 WBP4O75554 376 aaKnown RBP12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 FABP3P05413 133 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 HIST1H2AGP0C0S8 130 aaPredicted RBP12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 SELPP16109 830 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 AMD1P17707 334 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 HIST1H2ADP20671 130 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 HLA-FP30511 346 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 KDELR2P33947 212 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 CRATP43155 626 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 PPP3CCP48454 512 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 DOC2BQ14184 412 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 OLIG3Q7RTU3 272 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 TMPRSS9Q7Z410 1059 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 C1orf52Q8N6N3 182 aaKnown RBP12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 GTPBP3Q969Y2 492 aaKnown RBP12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 CIDECQ96AQ7 238 aaPredicted RBP12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 PLD4Q96BZ4 506 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 MAGED4Q96JG8 741 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 HIST1H2AHQ96KK5 128 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 HIST1H2AJQ99878 128 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 H2AFJQ9BTM1 129 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 NTMT1Q9BV86 223 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 KCNH6Q9H252 994 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 SLC35C2Q9NQQ7 365 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 HCFC1R1Q9NWW0 138 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 SAGE1Q9NXZ1 904 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 STMN3Q9NZ72 180 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 ZNF229Q9UJW7 825 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 FZD4Q9ULV1 537 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 SH2B3Q9UQQ2 575 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 GNG14A0A1W2PPG7 69 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 SMIM30A4D0T7 59 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 SSX4O60224 188 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 ETFAP13804 333 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 POU1F1P28069 291 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 NRIP1P48552 1158 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 WNT3P56703 355 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 GNG2P59768 71 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 SLC35A2P78381 396 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 PPA1Q15181 289 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 FRG2Q64ET8 278 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 CERS6Q6ZMG9 384 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 GAREM2Q75VX8 874 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 SPATC1Q76KD6 591 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 CALHM3Q86XJ0 350 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 CCDC36Q8IYA8 594 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 LGALS12Q96DT0 336 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 FRG2BQ96QU4 278 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 ACAT2Q9BWD1 397 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 ENOPH1Q9UHY7 261 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 SCN8AQ9UQD0 1980 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 CFAP54Q96N23 3096 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 A6NL46 340 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 H7C4K7 107 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 PI15O43692 258 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 ADRA2AP08913 450 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 CST5P28325 142 aaPredicted RBP12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 HOXA6P31267 233 aa12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 DNAJA1P31689 397 aaKnown RBP12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 FEN1P39748 380 aaKnown RBP12.75□□□□□ -0.37
KCNIP3-201ENST00000295225 METAP1P53582 386 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms