RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SLC15A1P46059 708 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 TMEM35AQ53FP2 167 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 CMPK2Q5EBM0 449 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 TOMM5Q8N4H5 51 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTCD1-201ENST00000292478 MT-ND5P03915 603 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 GLDCP23378 1020 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 GGT5P36269 586 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 KCNC1P48547 511 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 RCAN2Q14206 197 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 WSCD2Q2TBF2 565 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 KCT2Q8NC54 265 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 PSD4Q8NDX1 1056 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 C1orf216Q8TAB5 229 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 CPNE2Q96FN4 548 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-201ENST00000292478 PIP5K1AQ99755 562 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 B3GAT2Q9NPZ5 323 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 MED11Q9P086 117 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 MYH6P13533 1939 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 FANCGO15287 622 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 OXSR1O95747 527 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 HSD17B1P14061 328 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 DCDC1P59894 354 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 POU6F2P78424 691 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 RAB33AQ14088 237 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 ELAVL3Q14576 367 aaKnown RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 LASP1Q14847 261 aaKnown RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 AKIRIN2Q53H80 203 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 SUSD1Q6UWL2 747 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 RANBP10Q6VN20 620 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 RASSF6Q6ZTQ3 369 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 SLC15A3Q8IY34 581 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 MAPK15Q8TD08 544 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 NSUN5Q96P11 429 aaKnown RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 GFM1Q96RP9 751 aaKnown RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 PELOQ9BRX2 385 aaKnown RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 MMP27Q9H306 513 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 DPAGT1Q9H3H5 408 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 SERTAD3Q9UJW9 196 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 PCDHGB5Q9Y5G0 923 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 C1orf226A1L170 272 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 CNMDO75829 334 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 PRRT3Q5FWE3 981 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 ARL9Q6T311 187 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 UNC5DQ6UXZ4 953 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 YIPF7Q8N8F6 280 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 FIBINQ8TAL6 211 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 G6PC3Q9BUM1 346 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 WASH4PA8MWX3 477 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 NPIPA5E9PKD4 350 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 EMC8O43402 210 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 RLN2P04090 185 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 ITGB1P05556 798 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 HLA-EP13747 358 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 GKP32189 559 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 RBM34P42696 430 aaKnown RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 OR3A3P47888 321 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 OR3A2P47893 321 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 ARRB1P49407 418 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 PDX1P52945 283 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 TPTEP56180 551 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 SLC14A2Q15849 920 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 WDR45BQ5MNZ6 344 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 PDSS1Q5T2R2 415 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 OR5T3Q8NGG3 340 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 MCHR1Q99705 422 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 MARCH4Q9P2E8 410 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 NPIPA1Q9UND3 350 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 METTL21EPA6NDL7 271 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 PCDHGA12O60330 932 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 RBMXL2O75526 392 aaKnown RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 AK1P00568 194 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 CD9P21926 228 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 KDELR2P33947 212 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 FAM182AQ5T1J6 154 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 ASPGQ86U10 573 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 KLHDC7BQ96G42 594 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 P2RY13Q9BPV8 354 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 SMG9Q9H0W8 520 aaKnown RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 FBRSQ9HAH7 460 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 PLAGL1Q9UM63 463 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 CMAHPQ9Y471 501 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 ZCWPW2A0A1B0GU75 182 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 DENRO43583 198 aaKnown RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 CHRM5P08912 532 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 HOXD8P13378 290 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 NUDT6P53370 316 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 GABARAPL2P60520 117 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 FAM214AQ32MH5 1076 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 MORN1Q5T089 497 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 ARHGAP40Q5TG30 622 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 LCN8Q6JVE9 175 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 SIX5Q8N196 739 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 CBARPQ8N350 705 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-201ENST00000292478 COQ8BQ96D53 544 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 WDR92Q96MX6 357 aa12.32□□□□□ -0.44
PTCD1-201ENST00000292478 C5P01031 1676 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF821O75541 412 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms