RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 SUV39H1O43463 412 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 B3GALT2O43825 422 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 UGDHO60701 494 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 CLDN9O95484 217 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 TGFB1P01137 390 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 PHEXP78562 749 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 Q0VFX4 171 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 ABRAXAS2Q15018 415 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 NSDHLQ15738 373 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 CPSF6Q16630 551 aaKnown RBP eCLIP23.69■■□□□ 1.38
PDF-201ENST00000288022 ABHD17CQ6PCB6 329 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 ATG14Q6ZNE5 492 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 CHSY3Q70JA7 882 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 CPEB2Q7Z5Q1 589 aaKnown RBP23.69■■□□□ 1.38
PDF-201ENST00000288022 KBTBD2Q8IY47 623 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 CYP4X1Q8N118 509 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 TMEM151AQ8N4L1 468 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 OR2W6PQ8NHA6 318 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 REPS1Q96D71 796 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 NSUN5Q96P11 429 aaKnown RBP23.69■■□□□ 1.38
PDF-201ENST00000288022 CDK15Q96Q40 435 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 LHPPQ9H008 270 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 ZNF700Q9H0M5 742 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 ZNF552Q9H707 407 aaPredicted RBP23.69■■□□□ 1.38
PDF-201ENST00000288022 SEMA4BQ9NPR2 832 aaPredicted RBP23.69■■□□□ 1.38
PDF-201ENST00000288022 DCDC2Q9UHG0 476 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 RNF11Q9Y3C5 154 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 COL6A6A6NMZ7 2263 aa23.69■■□□□ 1.38
PDF-201ENST00000288022 IGHV3-20A0A0C4DH32 117 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 OR7A17O14581 309 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 DPM1O60762 260 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 CDH16O75309 829 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 MTTPP55157 894 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 RHAGQ02094 409 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 IFFO1Q0D2I5 559 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 PCOLCEQ15113 449 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 ANKRD37Q7Z713 158 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 SRFBP1Q8NEF9 429 aaKnown RBP23.68■■□□□ 1.38
PDF-201ENST00000288022 OR52B6Q8NGF0 335 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 HUS1BQ8NHY5 278 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 TSLPQ969D9 159 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 CMTM7Q96FZ5 175 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 QRFPRQ96P65 431 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 KCNC2Q96PR1 638 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 SERINC2Q96SA4 455 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 MTERF1Q99551 399 aaKnown RBP23.68■■□□□ 1.38
PDF-201ENST00000288022 NPLQ9BXD5 320 aaPredicted RBP23.68■■□□□ 1.38
PDF-201ENST00000288022 PARD6BQ9BYG5 372 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 C5AR2Q9P296 337 aa23.68■■□□□ 1.38
PDF-201ENST00000288022 SMG1Q96Q15 3661 aaKnown RBP23.68■■□□□ 1.38
PDF-201ENST00000288022 A0A1W2PQ72 361 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 MAGEB17A8MXT2 336 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 FAM227AF5H4B4 570 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 SAP18O00422 153 aaKnown RBP23.67■■□□□ 1.38
PDF-201ENST00000288022 GLRA3O75311 464 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 SEC24DO94855 1032 aaPredicted RBP23.67■■□□□ 1.38
PDF-201ENST00000288022 RPS17P08708 135 aaKnown RBP23.67■■□□□ 1.38
PDF-201ENST00000288022 CERS1P27544 350 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 RUNX2Q13950 521 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 TMEM35AQ53FP2 167 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 RPS27LQ71UM5 84 aaKnown RBP23.67■■□□□ 1.38
PDF-201ENST00000288022 HPS6Q86YV9 775 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 RNF175Q8N4F7 328 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 L3MBTL4Q8NA19 623 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 PLPP5Q8NEB5 264 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 PPP4R1Q8TF05 950 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 PTCHD1Q96NR3 888 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 TUBB6Q9BUF5 446 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 ROGDIQ9GZN7 287 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 OR51B5Q9H339 312 aa23.67■■□□□ 1.38
PDF-201ENST00000288022 H0YIV9 168 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 PRMT3O60678 531 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 UQCRHP07919 91 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 PLA2G2AP14555 144 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 ATP5F1P24539 256 aaPredicted RBP23.66■■□□□ 1.38
PDF-201ENST00000288022 PIK3CBP42338 1070 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 RAP1GDS1P52306 607 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 ACTN3Q08043 901 aaPredicted RBP23.66■■□□□ 1.38
PDF-201ENST00000288022 RASA2Q15283 850 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 ZRSR2Q15696 482 aaKnown RBP23.66■■□□□ 1.38
PDF-201ENST00000288022 AGAP7PQ5VUJ5 663 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 KHDRBS2Q5VWX1 349 aaKnown RBP23.66■■□□□ 1.38
PDF-201ENST00000288022 TTC19Q6DKK2 380 aaPredicted RBP23.66■■□□□ 1.38
PDF-201ENST00000288022 ZNF483Q8TF39 744 aaPredicted RBP23.66■■□□□ 1.38
PDF-201ENST00000288022 CAVIN3Q969G5 261 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 AGAP4Q96P64 663 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 CENPKQ9BS16 269 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 TBCDQ9BTW9 1192 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 MFRPQ9BY79 579 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 ZBTB26Q9HCK0 441 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 DMRT3Q9NQL9 472 aa23.66■■□□□ 1.38
PDF-201ENST00000288022 RTCAO00442 366 aaKnown RBP23.65■■□□□ 1.38
PDF-201ENST00000288022 DLX3O60479 287 aa23.65■■□□□ 1.38
PDF-201ENST00000288022 NUDT17P0C025 328 aa23.65■■□□□ 1.38
PDF-201ENST00000288022 PRR35P0CG20 571 aa23.65■■□□□ 1.38
PDF-201ENST00000288022 TSPAN8P19075 237 aa23.65■■□□□ 1.38
PDF-201ENST00000288022 CASRP41180 1078 aa23.65■■□□□ 1.38
PDF-201ENST00000288022 SSR2P43308 183 aa23.65■■□□□ 1.38
PDF-201ENST00000288022 CDH13P55290 713 aa23.65■■□□□ 1.38
PDF-201ENST00000288022 RAB38P57729 211 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms