RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 TRPC4APQ8TEL6 797 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 MAIP1Q8WWC4 291 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 RHBDF1Q96CC6 855 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 SENP8Q96LD8 212 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 Q96MF0 132 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 CHP1Q99653 195 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 AIFM2Q9BRQ8 373 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ALG12Q9BV10 488 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 NMNAT2Q9BZQ4 307 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 PRO3102Q9H379 93 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 MED20Q9H944 212 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 EQTNQ9NQ60 294 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 CTNNAL1Q9UBT7 734 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 NKX1-2Q9UD57 310 aaPredicted RBP4.36□□□□□ -1.71
CD44-202ENST00000278385 ZNHIT2Q9UHR6 403 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 SLC25A13Q9UJS0 675 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 PLCL2Q9UPR0 1127 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 CHMP2BQ9UQN3 213 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 PRELID1Q9Y255 219 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 CBY1Q9Y3M2 126 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ATP6V1DQ9Y5K8 247 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 SIPA1L1O43166 1804 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 PHIPQ8WWQ0 1821 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 A0A0U1RQV5 110 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 MARCH11A6NNE9 402 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 TCP11X1B4DZS4 312 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 SUPT3HB4E1H0 165 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 H0YIG0 161 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 H3BMM5 538 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 PSMD11O00231 422 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ZW10O43264 779 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ZNF208O43345 1280 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 SULT1B1O43704 296 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 DUSP11O75319 330 aaKnown RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 CREG1O75629 220 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 SERPINI2O75830 405 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 CLPXO76031 633 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ESRRBO95718 433 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 SNAI1O95863 264 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 SLPIP03973 132 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 GLAP06280 429 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ELANEP08246 267 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 MYZAPP0CAP1 466 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ZCCHC18P0CG32 403 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 SNHG28P0DPA3 235 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 SPP1P10451 314 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 EGR2P11161 476 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 HOXB9P17482 250 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 CEBPBP17676 345 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ITGAXP20702 1163 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 GSTM2P28161 218 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 HTR2AP28223 471 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 HOXA6P31267 233 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 RYKP34925 604 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 GPR143P51810 404 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ZNF75DP51815 510 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 CACNA2D1P54289 1103 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 IRX1P78414 480 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 BASP1P80723 227 aaKnown RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 PDE1BQ01064 536 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 OTUD4Q01804 1114 aaKnown RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 BST1Q10588 318 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ASPHQ12797 758 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 BTG3Q14201 252 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 LRRC26Q2I0M4 334 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 FAM174BQ3ZCQ3 159 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 CD300EQ496F6 205 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 HIKESHIQ53FT3 197 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 LRRC73Q5JTD7 316 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ATL3Q6DD88 541 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 SFRP4Q6FHJ7 346 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 RGS7BPQ6MZT1 257 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 Q6YL49 198 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 Q6ZNX1 250 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ZNF627Q7L945 461 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 RNF144BQ7Z419 303 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 NEK8Q86SG6 692 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 YRDCQ86U90 279 aaKnown RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 TDRPQ86YL5 185 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ZDHHC17Q8IUH5 632 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 PYROXD2Q8N2H3 581 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ZBTB2Q8N680 514 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 CCDC63Q8NA47 563 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 KLHDC9Q8NEP7 349 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ZNF397Q8NF99 534 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 OR9K2Q8NGE7 335 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 OR52L2PQ8NGH6 319 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 OR6S1Q8NH40 331 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 MYCBPAPQ8TBZ2 947 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ATL1Q8WXF7 558 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 FCGR1BQ92637 280 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 FAM46BQ96A09 425 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 KIAA1143Q96AT1 154 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 ZNF707Q96C28 371 aaPredicted RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 HAVCR1Q96D42 359 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 ZG16BQ96DA0 208 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 PGBD1Q96JS3 809 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 MS4A10Q96PG2 267 aa4.35□□□□□ -1.71
CD44-202ENST00000278385 TRNT1Q96Q11 434 aaKnown RBP4.35□□□□□ -1.71
CD44-202ENST00000278385 ADAM2Q99965 735 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms