RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 BRD7Q9NPI1 651 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 FBXL12Q9NXK8 326 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 NDRG2Q9UN36 371 aaKnown RBP10.37□□□□□ -0.75
CD44-201ENST00000263398 J3QLW9 94 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 IFNA7P01567 189 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 ZNF19P17023 458 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 CCND3P30281 292 aaPredicted RBP10.37□□□□□ -0.75
CD44-201ENST00000263398 NRIP1P48552 1158 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 MAZP56270 477 aaKnown RBP10.37□□□□□ -0.75
CD44-201ENST00000263398 EIF5AP63241 154 aaKnown RBP10.37□□□□□ -0.75
CD44-201ENST00000263398 LSAMPQ13449 338 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 ZNF234Q14588 700 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 ZNF776Q68DI1 518 aaPredicted RBP10.37□□□□□ -0.75
CD44-201ENST00000263398 SLC22A15Q8IZD6 547 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 LGALS12Q96DT0 336 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 MCHR1Q99705 422 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 SPATA9Q9BWV2 254 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 GPR62Q9BZJ7 368 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 MYH7P12883 1935 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 STRCP1A6NGW2 1772 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 TSPAN6O43657 245 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 GATBO75879 557 aaKnown RBP10.37□□□□□ -0.75
CD44-201ENST00000263398 FSHRP23945 695 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 GDI1P31150 447 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 MAGEA6P43360 314 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 OR4D1Q15615 310 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 CARM1Q86X55 608 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 OR2AJ1Q8NGZ0 328 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 MYRFLQ96LU7 910 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 ADAD1Q96M93 576 aaKnown RBP10.37□□□□□ -0.75
CD44-201ENST00000263398 BIRC8Q96P09 236 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 DGAT2Q96PD7 388 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 PHOX2BQ99453 314 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 ACSL5Q9ULC5 683 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 ZNF840PA6NDX5 716 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 PTGESO14684 152 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 RBMXL2O75526 392 aaKnown RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 MT-ND2P03891 347 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 NPRL3Q12980 569 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 TEAD2Q15562 447 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 ZNF805Q5CZA5 627 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 ZNF367Q7RTV3 350 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 ZBTB8BQ8NAP8 495 aaPredicted RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 OR2L5Q8NG80 312 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 OR4E2Q8NGC2 313 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 OR8J1Q8NGP2 316 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 ARNTL2Q8WYA1 636 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 SLC25A36Q96CQ1 311 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 COQ8BQ96D53 544 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 MAGIXQ9H6Y5 334 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 WDR37Q9Y2I8 494 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 TMEM98Q9Y2Y6 226 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 ST14Q9Y5Y6 855 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 H7BY64 318 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 PROM1O43490 865 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 STC2O76061 302 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 MT-ND5P03915 603 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 C8orf89P0DMQ9 161 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 IFI30P13284 250 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 GRIA2P42262 883 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 C4orf46Q504U0 113 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 THOC7Q6I9Y2 204 aaKnown RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 SLC27A4Q6P1M0 643 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 TRAM1L1Q8N609 369 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 MOAP1Q96BY2 351 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 PRAP1Q96NZ9 151 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 C17orf62Q9BQA9 187 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 FAM118AQ9NWS6 357 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 PAK1IP1Q9NWT1 392 aaPredicted RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 RGS17Q9UGC6 210 aaPredicted RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 ZNF639Q9UID6 485 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 HSPE1-MOB4S4R3N1 261 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 TEX46H3BTG2 121 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 NME4O00746 187 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 LEFTY1O75610 366 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 PENKP01210 267 aaPredicted RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 RBM34P42696 430 aaKnown RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 MEF2AQ02078 507 aaPredicted RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 LMAN2Q12907 356 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 GPM6BQ13491 265 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 NCEH1Q6PIU2 408 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 DNM1P34Q6PK57 102 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 ZSWIM9Q86XI8 627 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 STX12Q86Y82 276 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 AVL9Q8NBF6 648 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 BBS10Q8TAM1 723 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 PIP5K1AQ99755 562 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 DPYSL5Q9BPU6 564 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 PAAF1Q9BRP4 392 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 FUZQ9BT04 418 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 WACQ9BTA9 647 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 TIGARQ9NQ88 270 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 SDR39U1Q9NRG7 319 aaPredicted RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 ERVK-18Q9QC07 812 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 CMAHPQ9Y471 501 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 COL2A1P02458 1487 aaPredicted RBP10.36□□□□□ -0.75
CD44-201ENST00000263398 ITGB4P16144 1822 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 ISPDA4D126 451 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 FAAHO00519 579 aa10.36□□□□□ -0.75
CD44-201ENST00000263398 FGF18O76093 207 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms