RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 C1GALT1Q9NS00 363 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 PI4KAP42356 2102 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 H0YGG7 62 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 SH3BP5O60239 455 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 SCELO95171 688 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 HSD17B1P14061 328 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 HIST1H1TP22492 207 aaPredicted RBP21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 ATP5A1P25705 553 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 TRPC1P48995 793 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 ARF3P61204 181 aaPredicted RBP21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 MS4A2Q01362 244 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 TGM3Q08188 693 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 ZCCHC8Q6NZY4 707 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 ZCCHC7Q8N3Z6 543 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 CAMKVQ8NCB2 501 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 OR8J3Q8NGG0 315 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 MIEF2Q96C03 454 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 PPCDCQ96CD2 204 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 CCDC115Q96NT0 180 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 MAP3K3Q99759 626 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 DUSP23Q9BVJ7 150 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 SLC6A13Q9NSD5 602 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 ATAD3AQ9NVI7 634 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 SH3BP4Q9P0V3 963 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 BTNL2Q9UIR0 455 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 L3MBTL1Q9Y468 752 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 PCDH15Q96QU1 1955 aa21.77■■□□□ 1.08
SMARCB1-201ENST00000263121 KMT2EQ8IZD2 1858 aa21.77■■□□□ 1.07
SMARCB1-201ENST00000263121 PRSS51A0A1B0GVH4 220 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 PATE3B3GLJ2 98 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 ACOT8O14734 319 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 TBX19O60806 448 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 SMIM10L1P0DMW3 83 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 DDCP20711 480 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 MSX2P35548 267 aaPredicted RBP21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 CDKN2CP42773 168 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 GPR3P46089 330 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 EEFSECP57772 596 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 CCNIQ14094 377 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 ANXA8L1Q5VT79 327 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 MRM1Q6IN84 353 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 SLC23A3Q6PIS1 610 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 DNAJC14Q6Y2X3 702 aaPredicted RBP21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 MMP21Q8N119 569 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 ACOT4Q8N9L9 421 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 OR8K5Q8NH50 307 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 OR4C6Q8NH72 309 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 UTP15Q8TED0 518 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 RERGQ96A58 199 aaPredicted RBP21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 ASB9Q96DX5 294 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 SMIM10Q96HG1 83 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 EPB41L1Q9H4G0 881 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 GAREM1Q9H706 876 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 FAM60AQ9NP50 221 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 GMPR2Q9P2T1 348 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 SLC6A14Q9UN76 642 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 PCDHB14Q9Y5E9 798 aa21.76■■□□□ 1.07
SMARCB1-201ENST00000263121 IGHV1OR21-1A0A087WYE8 117 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 SLC9B1P1A6NJY1 282 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 RNASET2O00584 256 aaKnown RBP21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 RFXANKO14593 260 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 TCN1P20061 433 aaPredicted RBP21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 ALDH4A1P30038 563 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 GFERP55789 205 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 OR1D5P58170 312 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 RAB8AP61006 207 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 SELPLGQ14242 412 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 TRIM25Q14258 630 aaKnown RBP21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 HEPACAMQ14CZ8 416 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 GTDC1Q4AE62 458 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 RUNDC3AQ59EK9 446 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 FAM92BQ6ZTR7 304 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 ZNF764Q96H86 408 aaPredicted RBP21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 TLCD2A6NGC4 264 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 BCAS2O75934 225 aaPredicted RBP21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 FAM58BPP0C7Q3 252 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 ZNF888P0CJ79 500 aaPredicted RBP21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 ALPPL2P10696 532 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 LRRC74AQ0VAA2 488 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 PRSS53Q2L4Q9 553 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 MPEG1Q2M385 716 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 MUM1Q2TAK8 710 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 MANEAQ5SRI9 462 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 NKAIN2Q5VXU1 208 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 DGLUCYQ7Z3D6 616 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 TICAM1Q8IUC6 712 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 CLECL1Q8IZS7 167 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 VPS37AQ8NEZ2 397 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 CD180Q99467 661 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 MIEF1Q9NQG6 463 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 TEX10Q9NXF1 929 aaPredicted RBP21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 PRDM4Q9UKN5 801 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 PADI4Q9UM07 663 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 ERVK-11Q9UQG0 969 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 ASB4Q9Y574 426 aa21.75■■□□□ 1.07
SMARCB1-201ENST00000263121 URADA6NGE7 173 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 HCRTR1O43613 425 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 KIF1CO43896 1103 aaKnown RBP21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 MYF5P13349 255 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms