RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 FBXL12Q9NXK8 326 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNHIT2Q9UHR6 403 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 MN1Q10571 1320 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 IGLV3-12A0A075B6K2 115 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 IQANK1A0A1B0GTG1 560 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 NDUFAB1O14561 156 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 SERPINA6P08185 405 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 GSTA1P08263 222 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 MSL3P1P0C860 447 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 COL6A2P12110 1019 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 MYCLP1P12525 358 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 GEMP55040 296 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 PRKG2Q13237 762 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 CDH18Q13634 790 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 CYP27C1Q4G0S4 372 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 ANO7Q6IWH7 933 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 MRPL14Q6P1L8 145 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 TMEM220Q6QAJ8 160 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 UGT2A3Q6UWM9 527 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 USP30Q70CQ3 517 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 DSELQ8IZU8 1212 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 UTP15Q8TED0 518 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 TAMM41Q96BW9 452 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 KLHL25Q9H0H3 589 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 THG1LQ9NWX6 298 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 CACNA1DQ01668 2161 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 MT-ND1P03886 318 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 SP9P0CG40 484 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 SHMT2P34897 504 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 IL9RQ01113 521 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 ITIH4Q14624 930 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 UAP1L1Q3KQV9 507 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 IL23RQ5VWK5 629 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 GUSBP11Q6P575 273 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 SPATA21Q7Z572 469 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 KYQ8NBH2 561 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 VPS37AQ8NEZ2 397 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 MCUR1Q96AQ8 359 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 C16orf58Q96GQ5 468 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 TBC1D17Q9HA65 648 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 GPAMQ9HCL2 828 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 DMRT3Q9NQL9 472 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 DYRK4Q9NR20 520 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 LRRC42Q9Y546 428 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 EDDM13A0A1B0GTR0 161 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 SCG5P05408 212 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 CD63P08962 238 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 GPR3P46089 330 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 RHAGQ02094 409 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 RSPO4Q2I0M5 234 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 TRMT12Q53H54 448 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 CYBRD1Q53TN4 286 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 HEPHL1Q6MZM0 1159 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 AGTRAPQ6RW13 159 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 NEK10Q6ZWH5 1172 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC9B2Q86UD5 537 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 HORMAD1Q86X24 394 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 SCUBE1Q8IWY4 988 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 MRPS31Q92665 395 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 HLA-CQ95604 372 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 TCF12Q99081 682 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 HCAR1Q9BXC0 346 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 WWP1Q9H0M0 922 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 FAM83DQ9H4H8 585 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 ASCL3Q9NQ33 180 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 PPIEQ9UNP9 301 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 NAALAD2Q9Y3Q0 740 aa5.3□□□□□ -1.56
TOPBP1-201ENST00000260810 TCRBV21S2A2A0A5A6 115 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PIAS2O75928 621 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 C5AR1P21730 350 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 CLCN5P51795 746 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 KHDRBS2Q5VWX1 349 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 COMMD6Q7Z4G1 85 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ULK2Q8IYT8 1036 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ZPLD1Q8TCW7 415 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 MAGEB10Q96LZ2 347 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 DPEP2Q9H4A9 486 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 LMAN1LQ9HAT1 526 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 G3BP2Q9UN86 482 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 STK38LQ9Y2H1 464 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 MAGEB16A2A368 324 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PINLYPA6NC86 204 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 SPAG6O75602 509 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 NCK1P16333 377 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC20A2Q08357 652 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 STX3Q13277 289 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PDGFRLQ15198 375 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 AARS2Q5JTZ9 985 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 GKAP1Q5VSY0 366 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ZZZ3Q8IYH5 903 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PGBD3Q8N328 593 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 FAM71CQ8NEG0 241 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 TNIP2Q8NFZ5 429 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PDCD6IPQ8WUM4 868 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 C19orf60Q96EN9 201 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 CINPQ9BW66 212 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ZCCHC2Q9C0B9 1178 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 AGPAT4Q9NRZ5 378 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 DZANK1Q9NVP4 752 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms