RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 NIPAL4Q0D2K0 466 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 EXOC3L2Q2M3D2 409 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 GALNT10Q86SR1 603 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR51G2Q8NGK0 314 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF304Q9HCX3 659 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZCCHC3Q9NUD5 404 aaKnown RBP9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 PDE4DIPQ5VU43 2346 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 TLL1O43897 1013 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 CLUP10909 449 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF3P17036 446 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 DDX6P26196 483 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 PTPN6P29350 595 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 CDKN2CP42773 168 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 COL28A1Q2UY09 1125 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 VWA5B2Q8N398 1253 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 KCT2Q8NC54 265 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZCCHC10Q8TBK6 192 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 FCAMRQ8WWV6 532 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 KCTD13Q8WZ19 329 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 KIAA1191Q96A73 305 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 DHRS1Q96LJ7 313 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 SMOQ99835 787 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 KDM3BQ7LBC6 1761 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 STMND1H3BQB6 276 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 HMGN1P05114 100 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 KLK1P06870 262 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 FHP07954 510 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 C7P10643 843 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 TECRLQ5HYJ1 363 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 PRSS55Q6UWB4 352 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 CEACAM20Q6UY09 585 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC36A4Q6YBV0 504 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 UBQLNLQ8IYU4 475 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 HDHD5Q9BXW7 423 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 RBCK1Q9BYM8 510 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 HAPLN2Q9GZV7 340 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 RNF121Q9H920 327 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 SIAEQ9HAT2 523 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 HMX1Q9NP08 348 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 COPZ2Q9P299 210 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 TMEM181Q9P2C4 612 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 CITO14578 2027 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 TVP23AA6NH52 213 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 PROM1O43490 865 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 ARL6IP5O75915 188 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SPDEFO95238 335 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 MATN4O95460 622 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 AMD1P17707 334 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 HTR1EP28566 365 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SSTR2P30874 369 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC24A5Q71RS6 500 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SPATC1Q76KD6 591 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 FAM109AQ8N4B1 249 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 JAGN1Q8N5M9 183 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 YIPF7Q8N8F6 280 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 EIF5A2Q9GZV4 153 aaKnown RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 PCDHB16Q9NRJ7 776 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 ENPP5Q9UJA9 477 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 CACNB4O00305 520 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 VILLO15195 856 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 AQP9O43315 295 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SPARCP09486 303 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 ETV4P43268 484 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 VAMP2P63027 116 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 CD47Q08722 323 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 NPRL3Q12980 569 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 LNX2Q8N448 690 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 PNPLA1Q8N8W4 532 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 MYRFLQ96LU7 910 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 TLE6Q9H808 572 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 MEAF6Q9HAF1 191 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 MKS1Q9NXB0 559 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 MED1Q15648 1581 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 A0A1W2PQL4 384 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 BHMG1C9JSJ3 638 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 FMO6PO60774 539 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 GATBO75879 557 aaKnown RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 BEST1O76090 585 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 STATHP02808 62 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 EMX2Q04743 252 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 ARHGAP1Q07960 439 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 ILF3Q12906 894 aaKnown RBP eCLIP9.41□□□□□ -0.97e-6■□□□□ 9.5
CTDSPL2-201ENST00000260327 SNTA1Q13424 505 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 C6orf136Q5SQH8 315 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 C14orf80Q86SX3 495 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR5T3Q8NGG3 340 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR2L8Q8NGY9 312 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 MFSD8Q8NHS3 518 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 GPR151Q8TDV0 419 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 AHCYL2Q96HN2 611 aaKnown RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 DERL2Q9GZP9 239 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 IGFLR1Q9H665 355 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 NME4O00746 187 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 FGL2Q14314 439 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 GALEQ14376 348 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 CHRNA6Q15825 494 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SHQ1Q6PI26 577 aaKnown RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 FAM198BQ6UWH4 519 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 TMC8Q8IU68 726 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 HS3ST5Q8IZT8 346 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms