RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 MYLK4Q86YV6 388 aaPredicted RBP22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 PARP9Q8IXQ6 854 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 KBTBD2Q8IY47 623 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 C1QTNF3Q9BXJ4 246 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 NOL11Q9H8H0 719 aaKnown RBP22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 COPS7BQ9H9Q2 264 aaPredicted RBP22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 PCTPQ9UKL6 214 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 C4orf51C9J302 202 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 GOLGA8RI6L899 631 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 SLC28A2O43868 658 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 GLRA3O75311 464 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 CLDN9O95484 217 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 RPS17P08708 135 aaKnown RBP22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 SBK3P0C264 359 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 KRT15P19012 456 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 CCNG1P51959 295 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 ARFIP1P53367 373 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 PLA2G16P53816 162 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 MTTPP55157 894 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 RHAGQ02094 409 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 RCN2Q14257 317 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 ADNP2Q6IQ32 1131 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 QSOX2Q6ZRP7 698 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 PRICKLE2Q7Z3G6 844 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 CA13Q8N1Q1 262 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 RIBC1Q8N443 379 aaPredicted RBP22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 AENQ8WTP8 325 aaKnown RBP22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 CAVIN3Q969G5 261 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 THOC3Q96J01 351 aaKnown RBP22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 QRFPRQ96P65 431 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 KCNC2Q96PR1 638 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 CENPKQ9BS16 269 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 TBCDQ9BTW9 1192 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 PSD3Q9NYI0 1048 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 DOCK10Q96BY6 2186 aa22.94■■□□□ 1.26
SDF2L1-201ENST00000248958 A8MT66 165 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 MASP2O00187 686 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 TUBBP07437 444 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 NUDT17P0C025 328 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 CASRP41180 1078 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 TSFMP43897 325 aaKnown RBP22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 SLCO1A2P46721 670 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 EFNA3P52797 238 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 RAPSNQ13702 412 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 PCOLCEQ15113 449 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 NSDHLQ15738 373 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 C10orf62Q5T681 223 aaPredicted RBP22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 AGAP7PQ5VUJ5 663 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 IGFL3Q6UXB1 125 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 SLC22A9Q8IVM8 553 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 AGAP4Q96P64 663 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 F2RL3Q96RI0 385 aa22.93■■□□□ 1.26
SDF2L1-201ENST00000248958 A0A1W2PPM1 405 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 SYNDIG1LA6NDD5 238 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 DNAJB6O75190 326 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 CDC123O75794 336 aaPredicted RBP22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 SERPINA7P05543 415 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 ARL1P40616 181 aaPredicted RBP22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 CCT5P48643 541 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 RAB38P57729 211 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 CPSF6Q16630 551 aaKnown RBP eCLIP22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 DEPDC1Q5TB30 811 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 JMJD6Q6NYC1 403 aaPredicted RBP22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 ANKRD37Q7Z713 158 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 HUS1BQ8NHY5 278 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 EPS8L3Q8TE67 593 aaKnown RBP22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 MESP1Q9BRJ9 268 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 RBCK1Q9BYM8 510 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 PRDM7Q9NQW5 492 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 MRPS33Q9Y291 106 aaKnown RBP22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 MMACHCQ9Y4U1 282 aa22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 V9GYY5 206 aaPredicted RBP22.92■■□□□ 1.26
SDF2L1-201ENST00000248958 SCN2AQ99250 2005 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 A0A0G2JN53 185 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 OR7A17O14581 309 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 PRMT3O60678 531 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 B4GALT2O60909 372 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 OTCP00480 354 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 TGFB1P01137 390 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 PLA2G2AP14555 144 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 ATP5F1P24539 256 aaPredicted RBP22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 HERVK_113P63132 956 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 Q0VFX4 171 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 RUNX2Q13950 521 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 ABRAXAS2Q15018 415 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 ERCC6LQ2NKX8 1250 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 GGTA1PQ4G0N0 100 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 KHDRBS2Q5VWX1 349 aaKnown RBP22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 LANCL3Q6ZV70 420 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 SHISA5Q8N114 240 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 ARMC2Q8NEN0 867 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 PPP4R1Q8TF05 950 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 ZNF483Q8TF39 744 aaPredicted RBP22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 IMMP1LQ96LU5 166 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 ERVK-6Q9BXR3 956 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 ROPN1BQ9BZX4 212 aaPredicted RBP22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 ROPN1Q9HAT0 212 aaPredicted RBP22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 ZBTB26Q9HCK0 441 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 DMRT3Q9NQL9 472 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms